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NC_027996.1__YP_009168969.1__APL46_gp032__00031
Bact-VirNC_027996.1__YP_009168969.1__APL46_gp032__00031
Identity
- Accession:
- NC_027996 ↗
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_CPt10
TaxID: 2994045
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r0sA01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.56 | 46.0 | 3.39e-01 | 100.0% | 57.4% |
| 3pqhA02 | 2.20.70.60 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.54 | 28.0 | 3.18e-01 | 72.4% | 100.0% |
| 4a0tA02 | 6.20.70.20 | Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › | 0.53 | 31.0 | 3.46e-01 | 100.0% | 97.0% |
| 5anpA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.52 | 42.0 | 3.26e-01 | 94.8% | 74.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3575982 | 7516.1.1.157 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › LbH_EIF2B | 0.63 | 53.0 | 3.17e-01 | 96.6% | 20.4% |
| 2899619 | 208.1.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DCTN5 | 0.60 | 50.0 | 3.60e-01 | 96.6% | 46.7% |
| 4026908 | 208.1.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DCTN5 | 0.56 | 46.0 | 3.34e-01 | 96.6% | 54.6% |
| None | — | 0.54 | 45.0 | 3.37e-01 | 94.8% | 52.3% | |
| 4149052 | 208.1.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B | 0.53 | 44.0 | 3.13e-01 | 94.8% | 42.6% |
| None | — | 0.52 | 42.0 | 3.18e-01 | 100.0% | 62.9% |