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NC_027996.1__YP_009168969.1__APL46_gp032__00031

Bact-Vir

NC_027996.1__YP_009168969.1__APL46_gp032__00031

Identity

Accession:
NC_027996 ↗
Kingdom:
phage

Quality

83.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r0sA01 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.56 46.0 3.39e-01 100.0% 57.4%
3pqhA02 2.20.70.60 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.54 28.0 3.18e-01 72.4% 100.0%
4a0tA02 6.20.70.20 Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › 0.53 31.0 3.46e-01 100.0% 97.0%
5anpA00 3.10.310.50 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.52 42.0 3.26e-01 94.8% 74.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3575982 7516.1.1.157 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › LbH_EIF2B 0.63 53.0 3.17e-01 96.6% 20.4%
2899619 208.1.1.9 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DCTN5 0.60 50.0 3.60e-01 96.6% 46.7%
4026908 208.1.1.9 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DCTN5 0.56 46.0 3.34e-01 96.6% 54.6%
None 0.54 45.0 3.37e-01 94.8% 52.3%
4149052 208.1.1.16 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B 0.53 44.0 3.13e-01 94.8% 42.6%
None 0.52 42.0 3.18e-01 100.0% 62.9%