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NC_028652.1__YP_009186936.1__AU075_gp046__00046

Bact-Vir

NC_028652.1__YP_009186936.1__AU075_gp046__00046

Identity

Accession:
NC_028652 ↗
Kingdom:
phage

Quality

73.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-110
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j5uA01 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.61 44.0 4.28e-01 100.0% 68.4%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 38.0 3.27e-01 76.9% 43.8%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.55 39.0 3.30e-01 75.0% 69.1%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.55 35.0 3.82e-01 75.0% 78.7%
1yzhB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 38.0 3.01e-01 75.0% 44.2%
5eokA04 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.51 34.0 3.80e-01 100.0% 89.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3250910 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.56 36.0 4.30e-01 77.8% 100.0%
4354369 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.54 39.0 3.91e-01 75.0% 80.0%
5046395 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.53 35.0 4.07e-01 75.0% 97.3%