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NC_028683.1__YP_009190383.1__AU156_gp226__00225

Bact-Vir

NC_028683.1__YP_009190383.1__AU156_gp226__00225

Identity

Accession:
NC_028683 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Kanagawavirus› Edwardsiella_phage_PEi20

TaxID: 1608310

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-88
PDB
Domain cluster: rep: OR525698.1__WQN06384.1__X__00056__D8-103
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 37.0 4.55e-01 100.0% 90.0%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 49.0 5.10e-01 97.6% 88.2%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.45e-01 100.0% 77.6%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.61e-01 100.0% 90.9%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 36.0 3.95e-01 98.8% 74.3%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 32.0 3.40e-01 72.6% 58.9%
4z24A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 50.0 3.31e-01 95.2% 85.8%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 3.22e-01 94.0% 73.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 36.0 4.12e-01 100.0% 87.1%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 50.0 4.46e-01 97.6% 96.7%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 49.0 3.66e-01 96.4% 86.2%
4k7zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 49.0 3.62e-01 96.4% 83.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 36.0 3.86e-01 100.0% 77.5%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 47.0 3.05e-01 94.0% 91.0%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.56 49.0 3.09e-01 98.8% 35.0%
5ygqA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 47.0 4.27e-01 97.6% 97.5%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 39.0 3.48e-01 73.8% 79.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.75e-01 100.0% 75.3%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 46.0 4.08e-01 97.6% 96.0%
1w99A03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.54 46.0 3.72e-01 100.0% 95.0%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 29.0 3.11e-01 70.2% 59.2%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.81e-01 100.0% 83.1%
1sqhA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 39.0 3.40e-01 82.1% 51.1%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.53 35.0 3.88e-01 100.0% 93.7%
1xtfA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.52 40.0 2.63e-01 85.7% 64.4%
1xezA04 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.51 43.0 3.79e-01 100.0% 94.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5076401 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 36.0 3.96e-01 100.0% 64.3%
4936253 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 36.0 3.94e-01 100.0% 64.3%
3393324 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.65 50.0 4.62e-01 82.1% 91.4%
4948433 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.60 37.0 4.00e-01 100.0% 75.0%
4307735 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.60 51.0 3.31e-01 94.0% 88.4%
5052257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 35.0 3.93e-01 100.0% 80.0%
3867384 4.1.1.50 ↗ beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.59 44.0 4.49e-01 100.0% 83.7%
4887368 389.1.1.15 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_MSP1_1 0.58 28.0 3.29e-01 73.8% 64.3%
4235338 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.58 26.0 3.46e-01 83.3% 85.0%
3407530 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.58 43.0 3.73e-01 81.0% 86.7%
5027131 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.57 34.0 3.90e-01 83.3% 81.7%
4378659 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.56 28.0 3.42e-01 70.2% 80.0%
4039929 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 35.0 3.79e-01 82.1% 80.0%
3490023 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.80e-01 98.8% 98.8%
4291404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 41.0 4.28e-01 100.0% 88.0%
4578663 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 36.0 3.84e-01 79.8% 78.6%
4000622 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.55 35.0 3.15e-01 96.4% 45.0%
5042525 3008.1.1.0 ↗ a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.55 46.0 4.22e-01 92.9% 89.1%
3741878 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 38.0 4.11e-01 100.0% 93.8%
5035835 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.54 33.0 3.70e-01 82.1% 83.3%
4990182 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.54 39.0 4.08e-01 77.4% 93.3%
4014861 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 37.0 2.71e-01 73.8% 46.1%
3215598 391.1.1.13 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWC2L_2nd 0.53 29.0 3.51e-01 89.3% 81.8%
3281056 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.53 39.0 3.11e-01 81.0% 58.7%
4944045 4.17.1.2 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.52 34.0 3.61e-01 100.0% 78.6%
4633583 76.1.1.2 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.52 43.0 3.57e-01 94.0% 98.7%
4295522 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.51 37.0 3.49e-01 91.7% 61.9%
3327525 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.51 37.0 3.23e-01 91.7% 48.1%
3208578 76.1.1.7 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › DUF7600 0.51 42.0 3.79e-01 95.2% 94.4%
3723415 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.50 37.0 2.50e-01 78.6% 82.5%
D2 high residues 93-137
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jveA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.77 59.0 5.16e-01 100.0% 54.9%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.73 64.0 5.46e-01 100.0% 94.4%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.72 54.0 3.55e-01 82.2% 35.5%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.71 59.0 4.97e-01 100.0% 68.3%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 57.0 5.06e-01 100.0% 97.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.68 56.0 3.93e-01 100.0% 44.3%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 54.0 4.61e-01 100.0% 94.1%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.67 54.0 4.92e-01 100.0% 66.7%
3h20A02 3.30.70.1790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain 0.67 55.0 4.39e-01 100.0% 69.9%
2y1rK00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 53.0 4.27e-01 91.1% 69.6%
4ccdA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 53.0 3.30e-01 100.0% 15.9%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.66 54.0 5.27e-01 100.0% 88.0%
2yuwA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 54.0 4.30e-01 100.0% 43.9%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.66 51.0 3.46e-01 93.3% 89.5%
2lvhA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.65 49.0 4.95e-01 100.0% 82.2%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.64 50.0 4.29e-01 97.8% 50.6%
3n6xA03 3.30.1490.270 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.64 44.0 4.16e-01 73.3% 85.7%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.63 52.0 4.28e-01 100.0% 54.3%
8os3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 53.0 4.29e-01 100.0% 47.8%
4bs9A01 3.90.930.60 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.62 48.0 3.76e-01 84.4% 81.1%
1auvA01 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.62 48.0 4.48e-01 100.0% 68.3%
1e25A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.62 44.0 2.74e-01 75.6% 78.8%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.71e-01 100.0% 38.7%
3lqmA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 47.0 3.74e-01 100.0% 39.2%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.60 51.0 3.72e-01 100.0% 36.1%
3rgzA02 3.30.1490.310 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.60 50.0 4.65e-01 100.0% 82.0%
3vskA02 1.10.10.1230 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain 0.60 45.0 3.38e-01 93.3% 100.0%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.60 44.0 3.46e-01 84.4% 33.9%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 44.0 3.36e-01 100.0% 34.3%
2pjyC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.59 49.0 4.18e-01 100.0% 63.3%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 46.0 3.88e-01 100.0% 52.1%
5ck3C00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 43.0 3.40e-01 84.4% 81.9%
3k7mX02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.57 46.0 3.14e-01 100.0% 34.0%
2hczX02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.57 47.0 3.63e-01 100.0% 40.4%
2aehA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 42.0 3.51e-01 100.0% 41.7%
5d8dD03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.56 42.0 3.92e-01 100.0% 62.1%
5n70A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.56 46.0 3.28e-01 100.0% 46.0%
2rftA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.56 45.0 2.96e-01 100.0% 37.2%
1whoA00 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.56 45.0 3.63e-01 100.0% 44.7%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.56 40.0 2.94e-01 84.4% 37.9%
1c4pC00 3.10.20.180 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 47.0 3.41e-01 97.8% 56.1%
6grqA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.73e-01 100.0% 49.5%
1nrjA00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 39.0 2.92e-01 84.4% 27.9%
1w63Q00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 43.0 3.07e-01 88.9% 44.6%
3tqtA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.55 44.0 3.94e-01 100.0% 63.2%
2gnxA02 3.30.450.240 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 39.0 3.17e-01 86.7% 35.8%
4bwsF00 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.54 42.0 3.85e-01 100.0% 61.2%
3l4jA04 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 44.0 3.53e-01 100.0% 52.9%
2kdoA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.65e-01 100.0% 83.7%
4iwxA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 41.0 3.15e-01 86.7% 49.5%
1ajwA00 2.70.50.30 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › Coagulation Factor XIII, subunit A, domain 1 0.52 44.0 3.14e-01 100.0% 34.5%
4ekuA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 40.0 3.19e-01 97.8% 55.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4501630 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.83 73.0 6.05e-01 100.0% 90.0%
5062485 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.79 70.0 5.67e-01 100.0% 85.9%
5035801 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.78 67.0 5.50e-01 100.0% 84.7%
4147528 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.78 66.0 5.81e-01 100.0% 98.6%
4988226 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.76 68.0 5.38e-01 100.0% 94.4%
4231372 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.75 63.0 5.54e-01 100.0% 97.1%
4193755 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.75 64.0 5.50e-01 100.0% 92.0%
3760983 3335.1.1.3 ↗ beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C 0.74 64.0 5.00e-01 100.0% 97.0%
5053007 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.73 58.0 4.86e-01 91.1% 90.0%
4931923 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.72 62.0 5.19e-01 100.0% 86.3%
3959440 4.1.1.180 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3107 0.70 57.0 5.24e-01 100.0% 98.5%
3491652 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.68 52.0 4.33e-01 100.0% 45.9%
3284390 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 54.0 4.31e-01 100.0% 77.1%
3575366 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.67 50.0 4.04e-01 100.0% 40.0%
1954211 3346.1.1.1 ↗ a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › UfSP2_N 0.66 57.0 3.70e-01 95.6% 25.4%
3958896 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.66 53.0 4.99e-01 97.8% 75.0%
3281602 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.66 51.0 5.04e-01 100.0% 85.4%
5000280 5103.1.1.0 ↗ a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 0.66 57.0 4.46e-01 100.0% 64.0%
5022263 322.1.1.2 ↗ a+b two layers › HPr-like › HPr-like › HPr-like › 3H 0.66 56.0 4.31e-01 100.0% 98.2%
4059719 304.9.1.61 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM 0.66 54.0 4.72e-01 100.0% 88.0%
5747 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.64 50.0 4.88e-01 97.8% 81.5%
4940035 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 48.0 3.64e-01 82.2% 81.8%
5036839 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.64 52.0 4.71e-01 100.0% 98.6%
2496895 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.31e-01 100.0% 48.5%
3218109 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.64 52.0 4.32e-01 100.0% 50.0%
5024071 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 45.0 3.43e-01 77.8% 76.5%
3503254 4007.1.1.0 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins 0.63 51.0 4.34e-01 97.8% 52.4%
3211869 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.63 48.0 3.93e-01 100.0% 43.3%
4978332 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.63 50.0 4.40e-01 100.0% 95.0%
3475200 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.63 48.0 3.47e-01 82.2% 77.7%
3184485 76.1.1.0 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.62 50.0 4.00e-01 100.0% 42.6%
5080205 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.62 51.0 5.03e-01 100.0% 88.0%
3618720 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 47.0 3.85e-01 100.0% 42.1%
3687651 4176.1.1.2 ↗ a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N 0.62 50.0 3.25e-01 100.0% 18.0%
3935630 3346.1.1.0 ↗ a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 0.61 51.0 3.38e-01 95.6% 24.9%
3722547 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 43.0 2.70e-01 77.8% 12.1%
3405569 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.61 53.0 4.03e-01 100.0% 55.5%
4967778 329.1.1.2 ↗ a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.61 44.0 3.51e-01 84.4% 87.3%
3551231 221.1.1.87 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N_2 0.59 45.0 3.55e-01 100.0% 38.1%
3216210 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.58 46.0 4.51e-01 100.0% 98.0%
3935405 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 47.0 3.92e-01 100.0% 70.0%
3906076 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 41.0 3.49e-01 100.0% 44.7%
4943853 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 2.99e-01 86.7% 43.4%
3646939 10.32.1.212 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind 0.55 46.0 3.13e-01 100.0% 29.2%
3610148 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.54 44.0 3.02e-01 93.3% 86.7%
3231713 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 41.0 3.54e-01 97.8% 68.9%
4018561 223.2.1.10 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.54 39.0 2.96e-01 86.7% 26.9%
4927303 525.1.1.1 ↗ a+b two layers › Urease, gamma-subunit › Urease, gamma-subunit › Urease, gamma-subunit › Urease_gamma 0.54 42.0 3.24e-01 93.3% 88.3%
4979655 301.9.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.53 42.0 3.20e-01 91.1% 44.8%
4968352 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.53 46.0 3.78e-01 97.8% 57.6%
3967464 275.1.1.0 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.53 44.0 4.06e-01 100.0% 71.7%
5011747 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.53 43.0 3.45e-01 88.9% 57.8%
3974610 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.52 41.0 3.19e-01 91.1% 69.1%
3347090 221.1.1.159 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7138 0.52 40.0 3.40e-01 93.3% 64.7%
3911249 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.51 39.0 3.33e-01 100.0% 66.3%
3935404 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.51 44.0 3.53e-01 100.0% 53.3%
3462014 221.1.1.159 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7138 0.50 39.0 3.32e-01 100.0% 81.1%