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NC_028697.1__YP_009191523.1__AU092_gp16__00016
Bact-VirNC_028697.1__YP_009191523.1__AU092_gp16__00016
Identity
- Accession:
- NC_028697 ↗
- Kingdom:
- phage
Quality
69.7
mean pLDDT
Taxonomy
TaxID: 1701850
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-60
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 66.0 | 6.41e-01 | 100.0% | 83.9% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 5.49e-01 | 100.0% | 95.7% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 63.0 | 6.07e-01 | 100.0% | 95.3% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 62.0 | 5.84e-01 | 98.2% | 92.5% |
| 1v29B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 60.0 | 5.08e-01 | 100.0% | 86.6% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 58.0 | 5.81e-01 | 100.0% | 93.0% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 5.45e-01 | 100.0% | 83.3% |
| 4fm4B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 4.81e-01 | 100.0% | 83.2% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 57.0 | 5.42e-01 | 100.0% | 94.1% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 57.0 | 4.38e-01 | 100.0% | 62.4% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 5.07e-01 | 100.0% | 88.7% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 59.0 | 5.52e-01 | 100.0% | 82.4% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 54.0 | 4.13e-01 | 100.0% | 40.0% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 54.0 | 4.84e-01 | 100.0% | 67.5% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 51.0 | 3.91e-01 | 100.0% | 38.9% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 49.0 | 5.08e-01 | 98.2% | 98.1% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.57 | 49.0 | 3.98e-01 | 98.2% | 50.9% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.57 | 48.0 | 4.44e-01 | 98.2% | 86.8% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.56 | 47.0 | 4.50e-01 | 100.0% | 81.8% |
| 5c98B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 45.0 | 3.51e-01 | 92.9% | 69.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.56 | 46.0 | 3.86e-01 | 100.0% | 53.2% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.60e-01 | 92.9% | 89.7% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 45.0 | 2.88e-01 | 100.0% | 87.3% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 3.53e-01 | 100.0% | 62.5% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 3.64e-01 | 96.4% | 63.3% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.53 | 44.0 | 3.49e-01 | 92.9% | 74.6% |
| 3qdhA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.27e-01 | 89.3% | 93.0% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 43.0 | 3.52e-01 | 98.2% | 80.7% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032123 | 4112.1.1.1 ↗ | beta duplicates or obligate multimers › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX | 0.80 | 54.0 | 5.34e-01 | 100.0% | 66.7% |
| 4398865 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.80 | 70.0 | 5.80e-01 | 96.4% | 84.2% |
| 4668201 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.79 | 56.0 | 5.86e-01 | 98.2% | 84.0% |
| 4169657 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.79 | 57.0 | 5.96e-01 | 98.2% | 86.0% |
| 3489469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 70.0 | 5.60e-01 | 100.0% | 81.0% |
| 3706000 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.77 | 69.0 | 6.22e-01 | 100.0% | 90.7% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.76 | 67.0 | 6.11e-01 | 100.0% | 88.0% |
| 4583465 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.76 | 54.0 | 5.68e-01 | 98.2% | 86.0% |
| 4932609 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 62.0 | 5.90e-01 | 100.0% | 78.5% |
| 4053957 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 55.0 | 5.75e-01 | 100.0% | 88.0% |
| 4534931 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 54.0 | 4.97e-01 | 100.0% | 58.7% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 55.0 | 5.58e-01 | 100.0% | 81.8% |
| 4585317 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 54.0 | 5.48e-01 | 100.0% | 80.0% |
| None | — | 0.74 | 65.0 | 4.07e-01 | 98.2% | 23.8% | |
| 3786978 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 64.0 | 6.02e-01 | 98.2% | 97.1% |
| 4400641 | 4.1.1.397 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29622 | 0.73 | 63.0 | 5.64e-01 | 98.2% | 90.0% |
| 3436022 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.73 | 54.0 | 5.45e-01 | 100.0% | 81.8% |
| 4058919 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.72 | 51.0 | 5.34e-01 | 98.2% | 86.0% |
| 3287628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 61.0 | 5.94e-01 | 98.2% | 93.8% |
| 5004050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 54.0 | 5.07e-01 | 100.0% | 65.7% |
| 4336500 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.72 | 52.0 | 5.24e-01 | 100.0% | 80.0% |
| 3339162 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.70 | 61.0 | 4.70e-01 | 100.0% | 51.5% |
| 3785385 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 51.0 | 4.43e-01 | 100.0% | 50.0% |
| 4483091 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 60.0 | 4.93e-01 | 100.0% | 64.8% |
| 3319789 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.69 | 59.0 | 5.22e-01 | 100.0% | 74.1% |
| 3484620 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 60.0 | 5.08e-01 | 100.0% | 81.1% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 4.76e-01 | 100.0% | 60.9% |
| 3229184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.11e-01 | 98.2% | 90.6% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.68 | 59.0 | 5.28e-01 | 100.0% | 77.5% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.68 | 59.0 | 5.42e-01 | 100.0% | 92.0% |
| 3229356 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 4.84e-01 | 100.0% | 91.4% |
| 4026193 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.13e-01 | 100.0% | 94.1% |
| 3675120 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 57.0 | 5.07e-01 | 98.2% | 76.5% |
| 3937006 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 59.0 | 5.31e-01 | 100.0% | 93.6% |
| 4425420 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 56.0 | 5.04e-01 | 100.0% | 72.9% |
| 4387099 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 56.0 | 5.11e-01 | 100.0% | 76.2% |
| 1263152 | 4.1.1.27 ↗ | beta barrels › SH3 › SH3 › SH3 › NHase_beta_C | 0.67 | 58.0 | 4.83e-01 | 100.0% | 85.1% |
| 4162968 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 57.0 | 5.16e-01 | 100.0% | 75.9% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 56.0 | 5.07e-01 | 98.2% | 73.8% |
| 4441682 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.66 | 55.0 | 3.39e-01 | 96.4% | 43.4% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 55.0 | 5.15e-01 | 98.2% | 84.3% |
| 3174977 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 57.0 | 4.74e-01 | 100.0% | 83.2% |
| 3595169 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 55.0 | 5.17e-01 | 100.0% | 88.6% |
| 3605154 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 53.0 | 3.15e-01 | 98.2% | 24.3% |
| 4110324 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.63 | 54.0 | 4.84e-01 | 100.0% | 85.0% |
| 3582433 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.62 | 47.0 | 3.69e-01 | 83.9% | 68.0% |
| 3591306 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 53.0 | 4.99e-01 | 98.2% | 88.6% |
| 3740784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 4.50e-01 | 100.0% | 74.1% |
| 4318553 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.60 | 50.0 | 3.26e-01 | 98.2% | 65.7% |
| 4187800 | 4.1.1.39 ↗ | beta barrels › SH3 › SH3 › SH3 › SHD1 | 0.59 | 45.0 | 4.47e-01 | 100.0% | 80.0% |
| 4125269 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.59 | 50.0 | 3.22e-01 | 100.0% | 20.3% |
| 3581140 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 44.0 | 2.80e-01 | 82.1% | 45.4% |
| 3703130 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 46.0 | 4.25e-01 | 89.3% | 80.0% |
| 4941831 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.58 | 43.0 | 3.28e-01 | 80.4% | 97.7% |
| 3708283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.25e-01 | 100.0% | 83.5% |
| 3700518 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.57 | 48.0 | 3.80e-01 | 100.0% | 60.0% |
| 3785641 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 43.0 | 4.02e-01 | 85.7% | 64.0% |
| 3597361 | 4.23.1.0 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like | 0.57 | 48.0 | 3.79e-01 | 100.0% | 60.0% |
| 3918299 | 4.1.1.376 ↗ | beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th | 0.56 | 47.0 | 4.41e-01 | 96.4% | 77.1% |
| 3660055 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.56 | 38.0 | 2.98e-01 | 73.2% | 53.4% |
| 3183270 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 48.0 | 3.77e-01 | 100.0% | 67.5% |
| 5066083 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.55 | 48.0 | 3.24e-01 | 100.0% | 32.1% |
| 3791570 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 39.0 | 2.52e-01 | 80.4% | 46.9% |
| 3578619 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.54 | 41.0 | 3.54e-01 | 91.1% | 55.2% |
| 3226909 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.54 | 45.0 | 4.22e-01 | 100.0% | 80.0% |
| 4338451 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.54 | 40.0 | 3.33e-01 | 91.1% | 43.2% |
| 3591481 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.53 | 43.0 | 3.28e-01 | 100.0% | 76.9% |
| 3586192 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.53 | 42.0 | 3.86e-01 | 91.1% | 74.7% |
| 3984883 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.53 | 39.0 | 3.20e-01 | 83.9% | 53.0% |
| 4027937 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.53 | 41.0 | 3.17e-01 | 100.0% | 91.8% |
| 3710518 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.52 | 42.0 | 3.10e-01 | 100.0% | 83.7% |
| 3457651 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 39.0 | 2.61e-01 | 89.3% | 33.0% |
| 3297744 | 5.1.4.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_3 | 0.52 | 40.0 | 2.42e-01 | 91.1% | 17.9% |
| 3584246 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.52 | 39.0 | 3.39e-01 | 91.1% | 53.8% |
| 3807401 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 39.0 | 3.52e-01 | 91.1% | 69.4% |