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NC_028746.1__YP_009193869.1__HARRISON_56__00056

Bact-Vir

NC_028746.1__YP_009193869.1__HARRISON_56__00056

Identity

Accession:
NC_028746 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Harrisonvirus› Paenibacillus_phage_Harrison

TaxID: 1636257

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-167
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.72 27.0 4.52e-01 87.8% 98.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 24.0 3.67e-01 97.6% 100.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 21.0 3.29e-01 95.1% 91.5%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 28.0 3.49e-01 99.4% 81.3%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 27.0 3.42e-01 100.0% 82.6%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.54 25.0 2.95e-01 98.8% 60.6%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.53 18.0 2.96e-01 77.4% 87.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 23.0 3.49e-01 95.1% 100.0%
2e7zA01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.52 20.0 3.10e-01 92.1% 93.0%
2y3aA01 3.10.20.770 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 23.0 1.96e-01 100.0% 23.6%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4147290 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.67 25.0 3.90e-01 99.4% 84.6%
3786430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 22.0 3.87e-01 95.1% 100.0%
4071917 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.63 22.0 3.75e-01 95.7% 100.0%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 27.0 4.06e-01 99.4% 100.0%
3300074 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 23.0 3.80e-01 96.3% 100.0%
3743614 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 24.0 3.71e-01 94.5% 93.3%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 24.0 3.61e-01 97.6% 86.6%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 26.0 3.79e-01 99.4% 92.9%
4284709 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.60 22.0 3.57e-01 93.9% 94.5%
3507639 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.59 27.0 3.90e-01 100.0% 98.6%
3784334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 22.0 3.40e-01 95.7% 86.7%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 23.0 3.56e-01 94.5% 100.0%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 26.0 3.75e-01 99.4% 100.0%
5018157 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.58 24.0 3.62e-01 97.0% 100.0%
4224041 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.56 25.0 3.48e-01 98.2% 86.7%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 21.0 3.14e-01 94.5% 80.0%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.54 23.0 3.19e-01 98.2% 80.0%
3636503 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.54 25.0 3.61e-01 97.6% 100.0%
5026824 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 22.0 3.19e-01 98.8% 85.7%
3687350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 19.0 3.04e-01 79.3% 90.9%
3277860 4.1.1.368 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.52 22.0 3.06e-01 97.0% 84.6%
5053568 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 39.0 4.20e-01 77.4% 100.0%
4041376 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 24.0 3.36e-01 92.7% 91.3%
4960839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 23.0 2.87e-01 80.5% 68.0%