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NC_028759.1__YP_009195284.1__SEA_MUFASA_38__00038
Bact-VirNC_028759.1__YP_009195284.1__SEA_MUFASA_38__00038
Identity
- Accession:
- NC_028759 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Taxonomy
TaxID: 1718600
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-111
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.61 | 38.0 | 4.09e-01 | 100.0% | 75.0% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.60 | 52.0 | 3.85e-01 | 100.0% | 48.9% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.56 | 45.0 | 3.16e-01 | 91.2% | 81.6% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 34.0 | 3.51e-01 | 72.1% | 64.2% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.53 | 37.0 | 2.96e-01 | 73.5% | 59.6% |
| 2xvoB00 | 2.60.120.1670 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 2.72e-01 | 75.0% | 90.6% |
| 1t6eX01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 35.0 | 2.71e-01 | 73.5% | 67.2% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.80e-01 | 75.0% | 89.7% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.50 | 39.0 | 2.35e-01 | 86.8% | 11.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3955550 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.82 | 71.0 | 6.70e-01 | 92.6% | 83.7% |
| 3511269 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.57 | 43.0 | 3.64e-01 | 83.8% | 46.7% |
| 4017465 | 928.1.1.0 ↗ | few secondary structure elements › Bubble protein › Bubble protein › Bubble protein | 0.54 | 33.0 | 3.87e-01 | 73.5% | 85.7% |
| 3185909 | 394.1.1.2 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_19 | 0.54 | 33.0 | 3.89e-01 | 73.5% | 86.0% |
| 3480321 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 38.0 | 3.64e-01 | 73.5% | 90.9% |
| 3834572 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.54 | 42.0 | 3.43e-01 | 85.3% | 53.1% |
| 4594372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 36.0 | 3.39e-01 | 72.1% | 72.2% |
| 3962940 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.52 | 41.0 | 2.88e-01 | 91.2% | 64.9% |
| 3844858 | 220.1.1.39 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZFYVE21_C | 0.51 | 35.0 | 2.81e-01 | 73.5% | 61.0% |
| 5081569 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.51 | 43.0 | 3.85e-01 | 98.5% | 84.0% |
| 1488002 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.50 | 39.0 | 3.36e-01 | 86.8% | 52.2% |
| 4988784 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.50 | 42.0 | 3.42e-01 | 97.1% | 92.0% |