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NC_028767.1__YP_009196181.1__VEGAS_82__00082
Bact-VirNC_028767.1__YP_009196181.1__VEGAS_82__00082
Identity
- Accession:
- NC_028767 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Taxonomy
TaxID: 1636261
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 25-86
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15919.12 best | HicB_lk_antitox | 32.0 | 1.70e-07 | 87.1% | 40.6% |
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6g1nD01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.91 | 74.0 | 6.57e-01 | 90.3% | 63.9% |
| 2dsyD00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.88 | 82.0 | 7.35e-01 | 100.0% | 75.3% |
| 4p78A00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.87 | 68.0 | 6.06e-01 | 91.9% | 60.5% |
| 5yrzA01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.85 | 74.0 | 6.05e-01 | 98.4% | 55.2% |
| 2l2nA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.79 | 66.0 | 6.34e-01 | 91.9% | 95.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.78 | 69.0 | 6.64e-01 | 98.4% | 94.4% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.75 | 60.0 | 5.78e-01 | 87.1% | 90.3% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.75 | 66.0 | 6.43e-01 | 98.4% | 89.6% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.74 | 65.0 | 5.53e-01 | 98.4% | 78.4% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 63.0 | 5.51e-01 | 95.2% | 76.1% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 62.0 | 5.85e-01 | 93.5% | 93.2% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 61.0 | 5.26e-01 | 95.2% | 86.1% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.72 | 62.0 | 5.46e-01 | 98.4% | 76.6% |
| 2wzoA01 | 3.30.160.360 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.72 | 56.0 | 4.41e-01 | 87.1% | 39.8% |
| 2kouA00 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.71 | 62.0 | 5.24e-01 | 96.8% | 73.5% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.71 | 60.0 | 5.08e-01 | 95.2% | 60.0% |
| 1qu6A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.71 | 63.0 | 5.93e-01 | 100.0% | 86.8% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.71 | 59.0 | 4.72e-01 | 93.5% | 92.0% |
| 1r7lA00 | 3.30.2120.10 | Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like | 0.71 | 57.0 | 4.74e-01 | 85.5% | 81.6% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.69 | 57.0 | 4.30e-01 | 95.2% | 84.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.68 | 50.0 | 3.81e-01 | 77.4% | 77.9% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 57.0 | 5.35e-01 | 98.4% | 81.0% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 47.0 | 3.22e-01 | 75.8% | 97.3% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.65 | 46.0 | 2.88e-01 | 75.8% | 23.5% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 54.0 | 4.43e-01 | 95.2% | 85.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.65 | 50.0 | 3.97e-01 | 90.3% | 78.2% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.63 | 54.0 | 5.23e-01 | 98.4% | 94.4% |
| 3bs4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 3.10e-01 | 80.6% | 99.2% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 47.0 | 3.21e-01 | 85.5% | 97.8% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.60 | 49.0 | 3.87e-01 | 91.9% | 80.9% |
| 4tl8F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 45.0 | 3.15e-01 | 82.3% | 100.0% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 51.0 | 3.39e-01 | 100.0% | 42.6% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.60 | 43.0 | 3.47e-01 | 79.0% | 60.6% |
| 7z0sE02 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.59 | 52.0 | 3.34e-01 | 100.0% | 53.9% |
| 1gkkA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 50.0 | 3.34e-01 | 100.0% | 91.5% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.59 | 42.0 | 3.87e-01 | 87.1% | 56.3% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 3.73e-01 | 80.6% | 90.0% |
| 6vq6H01 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 51.0 | 3.55e-01 | 100.0% | 61.3% |
| 6kmoB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 3.03e-01 | 93.5% | 81.1% |
| 4l9aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 44.0 | 2.91e-01 | 85.5% | 97.1% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.57 | 45.0 | 3.90e-01 | 90.3% | 85.3% |
| 3ga7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 49.0 | 3.14e-01 | 98.4% | 85.1% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 41.0 | 3.54e-01 | 77.4% | 90.9% |
| 2fjlA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 41.0 | 3.16e-01 | 79.0% | 79.3% |
| 6kd0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 48.0 | 3.12e-01 | 100.0% | 86.4% |
| 1sfeA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.56 | 43.0 | 4.05e-01 | 88.7% | 100.0% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.55 | 40.0 | 3.38e-01 | 82.3% | 43.9% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.55 | 38.0 | 3.60e-01 | 77.4% | 60.0% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.55 | 43.0 | 3.86e-01 | 88.7% | 69.7% |
| 4wy5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 46.0 | 2.97e-01 | 98.4% | 83.7% |
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 44.0 | 3.70e-01 | 95.2% | 97.5% |
| 3b5hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.09e-01 | 91.9% | 87.8% |
| 5l2pA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.01e-01 | 100.0% | 84.3% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 42.0 | 2.86e-01 | 88.7% | 96.6% |
| 1vwxH02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 40.0 | 3.50e-01 | 83.9% | 71.8% |
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.54 | 36.0 | 3.40e-01 | 79.0% | 55.8% |
| 1xfdA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.06e-01 | 96.8% | 29.0% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.54 | 36.0 | 3.06e-01 | 83.9% | 36.9% |
| 2k3dA00 | 3.10.450.130 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains | 0.54 | 40.0 | 3.66e-01 | 83.9% | 58.6% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.52 | 43.0 | 3.45e-01 | 100.0% | 57.9% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.84e-01 | 95.2% | 65.7% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 3.67e-01 | 91.9% | 74.8% |
| 3tekA00 | 3.30.470.50 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.52 | 42.0 | 3.34e-01 | 93.5% | 45.3% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 36.0 | 3.66e-01 | 75.8% | 81.4% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.07e-01 | 75.8% | 71.2% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 40.0 | 3.56e-01 | 91.9% | 94.8% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992542 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.98 | 80.0 | 8.50e-01 | 87.1% | 94.5% |
| 4966261 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.96 | 77.0 | 7.61e-01 | 88.7% | 80.0% |
| 4948406 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.95 | 75.0 | 7.54e-01 | 87.1% | 81.0% |
| 4634689 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.95 | 80.0 | 7.88e-01 | 98.4% | 84.6% |
| 4967355 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.94 | 77.0 | 7.60e-01 | 91.9% | 81.5% |
| 4966362 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.94 | 83.0 | 7.86e-01 | 98.4% | 81.4% |
| 5048184 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.93 | 76.0 | 6.54e-01 | 90.3% | 58.9% |
| 3964270 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.93 | 75.0 | 6.49e-01 | 90.3% | 58.9% |
| 5028523 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.92 | 77.0 | 7.60e-01 | 96.8% | 84.6% |
| 5029920 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.91 | 71.0 | 7.03e-01 | 87.1% | 78.5% |
| 4929701 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.90 | 74.0 | 7.54e-01 | 96.8% | 90.0% |
| 5002624 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.89 | 73.0 | 6.97e-01 | 93.5% | 77.1% |
| 4967687 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.89 | 71.0 | 6.80e-01 | 93.5% | 74.3% |
| 4950216 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.89 | 65.0 | 7.34e-01 | 90.3% | 100.0% |
| 4649870 | 4100.1.1.4 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › UPF0150 | 0.88 | 76.0 | 7.48e-01 | 98.4% | 87.7% |
| 2410066 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.87 | 73.0 | 6.27e-01 | 91.9% | 59.8% |
| 4289599 | 4100.1.1.5 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB-like_2 | 0.84 | 68.0 | 6.49e-01 | 91.9% | 77.1% |
| 3676562 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.83 | 75.0 | 5.11e-01 | 98.4% | 32.7% |
| 4497086 | 4100.1.1.5 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB-like_2 | 0.83 | 72.0 | 6.58e-01 | 96.8% | 73.8% |
| 3910488 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.81 | 74.0 | 6.60e-01 | 100.0% | 88.2% |
| 3494433 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.81 | 73.0 | 5.76e-01 | 100.0% | 87.9% |
| 3823735 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.81 | 70.0 | 6.29e-01 | 95.2% | 78.8% |
| 3515207 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.80 | 71.0 | 6.28e-01 | 98.4% | 74.4% |
| 3495949 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.80 | 72.0 | 6.33e-01 | 100.0% | 74.4% |
| 4194213 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.79 | 68.0 | 6.56e-01 | 93.5% | 92.9% |
| 4537756 | 330.1.1.25 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26980 | 0.79 | 71.0 | 6.37e-01 | 100.0% | 78.8% |
| 3825518 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.78 | 70.0 | 6.57e-01 | 98.4% | 85.3% |
| 3554081 | 330.1.1.8 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dsRBD | 0.77 | 65.0 | 6.40e-01 | 91.9% | 92.3% |
| 3516863 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.77 | 65.0 | 5.55e-01 | 90.3% | 64.2% |
| 3487251 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.77 | 66.0 | 6.12e-01 | 96.8% | 80.0% |
| 3299579 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.77 | 68.0 | 6.57e-01 | 98.4% | 92.9% |
| 4319496 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.77 | 66.0 | 6.39e-01 | 95.2% | 91.4% |
| 4266613 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.76 | 69.0 | 6.18e-01 | 100.0% | 80.0% |
| 3739406 | 330.1.1.9 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dcr1-like_dsRNA-bd_dom | 0.76 | 68.0 | 5.67e-01 | 98.4% | 79.0% |
| 3462089 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.76 | 67.0 | 6.08e-01 | 100.0% | 81.2% |
| 3627521 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.76 | 64.0 | 5.47e-01 | 93.5% | 70.0% |
| 3742474 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.76 | 69.0 | 6.44e-01 | 100.0% | 88.0% |
| 3395408 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.76 | 68.0 | 5.58e-01 | 100.0% | 91.8% |
| 1168794 | 330.1.1.8 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dsRBD | 0.75 | 66.0 | 5.68e-01 | 98.4% | 63.2% |
| 4200278 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.75 | 66.0 | 6.06e-01 | 96.8% | 86.3% |
| 3496171 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.75 | 64.0 | 5.64e-01 | 93.5% | 73.3% |
| 4487255 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.75 | 67.0 | 6.32e-01 | 100.0% | 86.7% |
| 3435374 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.75 | 65.0 | 5.88e-01 | 98.4% | 78.8% |
| 3240286 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.74 | 67.0 | 5.27e-01 | 100.0% | 81.6% |
| 3831398 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 65.0 | 5.77e-01 | 100.0% | 77.8% |
| 3333293 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 66.0 | 6.16e-01 | 98.4% | 81.3% |
| 3179206 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.73 | 65.0 | 6.04e-01 | 100.0% | 81.0% |
| 3928223 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 66.0 | 5.80e-01 | 100.0% | 83.3% |
| 3411333 | 3131.1.1.1 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC | 0.73 | 58.0 | 4.34e-01 | 88.7% | 34.8% |
| 3900353 | 3131.1.1.1 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC | 0.73 | 57.0 | 4.13e-01 | 87.1% | 30.3% |
| 3615641 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.73 | 66.0 | 5.87e-01 | 98.4% | 92.9% |
| 4002382 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.73 | 42.0 | 2.65e-01 | 79.0% | 12.2% |
| 3782775 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 64.0 | 5.59e-01 | 96.8% | 72.2% |
| 3432658 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.72 | 65.0 | 5.61e-01 | 100.0% | 69.5% |
| 3782338 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.72 | 64.0 | 5.61e-01 | 100.0% | 74.2% |
| 3750853 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.72 | 63.0 | 5.03e-01 | 96.8% | 58.3% |
| 3390831 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.71 | 64.0 | 5.85e-01 | 100.0% | 90.0% |
| 5060852 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.70 | 49.0 | 5.48e-01 | 80.6% | 100.0% |
| 3493131 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.70 | 62.0 | 5.28e-01 | 98.4% | 72.0% |
| 3596303 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 59.0 | 5.59e-01 | 96.8% | 85.3% |
| 3672898 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.68 | 48.0 | 3.80e-01 | 74.2% | 81.6% |
| 4396994 | 3755.3.1.305 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook | 0.67 | 41.0 | 2.25e-01 | 82.3% | 4.5% |
| 4087213 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.66 | 53.0 | 4.99e-01 | 88.7% | 76.0% |
| 5062942 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.64 | 48.0 | 5.02e-01 | 87.1% | 90.9% |
| 5013748 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 43.0 | 3.01e-01 | 71.0% | 23.9% |
| 4945226 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 43.0 | 2.77e-01 | 71.0% | 16.3% |
| 5013425 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 47.0 | 3.13e-01 | 80.6% | 99.6% |
| 4186865 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.62 | 48.0 | 3.12e-01 | 83.9% | 18.2% |
| 4202484 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.62 | 49.0 | 3.52e-01 | 83.9% | 30.6% |
| 3939453 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 48.0 | 3.79e-01 | 85.5% | 66.9% |
| 5047435 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 48.0 | 3.77e-01 | 90.3% | 39.6% |
| 5075211 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.60 | 40.0 | 4.31e-01 | 72.6% | 86.0% |
| 3907293 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 43.0 | 3.69e-01 | 79.0% | 64.8% |
| 3176053 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 43.0 | 3.44e-01 | 79.0% | 85.4% |
| 4874974 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.58 | 48.0 | 3.18e-01 | 98.4% | 86.8% |
| 3473908 | 220.1.1.157 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 | 0.58 | 45.0 | 3.33e-01 | 85.5% | 32.1% |
| 3496967 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 42.0 | 3.28e-01 | 79.0% | 77.9% |
| 3591459 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.57 | 43.0 | 3.89e-01 | 87.1% | 58.8% |
| 4121439 | 220.1.1.217 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM | 0.55 | 40.0 | 2.45e-01 | 75.8% | 53.0% |
| 3743129 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 43.0 | 3.62e-01 | 90.3% | 50.5% |
| 4018561 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.55 | 42.0 | 3.43e-01 | 93.5% | 40.0% |
| 357202 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.54 | 41.0 | 3.84e-01 | 85.5% | 73.2% |
| 3584264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 46.0 | 3.66e-01 | 98.4% | 90.4% |
| 3961859 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.52 | 43.0 | 2.73e-01 | 95.2% | 57.2% |
| 3272715 | 2484.2.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N | 0.51 | 41.0 | 3.95e-01 | 91.9% | 77.1% |
| 3789602 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 46.0 | 3.67e-01 | 100.0% | 89.6% |
D2
medium
residues 100-135
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03869.21 best | Arc | 22.1 | 1.50e-04 | 100.0% | 56.0% |
| PF05534.19 | HicB | 54.3 | 1.40e-14 | 97.2% | 68.6% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ba3A01 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.95 | 70.0 | 7.55e-01 | 77.8% | 96.6% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.93 | 85.0 | 6.05e-01 | 100.0% | 37.5% |
| 3ft7B00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.91 | 80.0 | 7.39e-01 | 100.0% | 78.3% |
| 1bazC00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.89 | 80.0 | 7.35e-01 | 100.0% | 78.3% |
| 3qoqC00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.87 | 78.0 | 7.05e-01 | 100.0% | 73.5% |
| 1p94A00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.87 | 74.0 | 5.83e-01 | 100.0% | 47.4% |
| 5unlB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.86 | 63.0 | 3.72e-01 | 80.6% | 11.1% |
| 1b01A00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.85 | 76.0 | 7.15e-01 | 100.0% | 83.7% |
| 5idyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.84 | 64.0 | 3.75e-01 | 83.3% | 11.5% |
| 4e4yA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.84 | 63.0 | 3.79e-01 | 83.3% | 12.4% |
| 1furB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.81 | 62.0 | 5.53e-01 | 83.3% | 58.8% |
| 3rd8A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.79 | 62.0 | 5.42e-01 | 86.1% | 59.3% |
| 2rhcA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.79 | 57.0 | 3.42e-01 | 80.6% | 11.7% |
| 3gg7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.79 | 65.0 | 3.85e-01 | 91.7% | 96.7% |
| 3oceA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.79 | 61.0 | 5.36e-01 | 86.1% | 58.2% |
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.79 | 56.0 | 3.38e-01 | 83.3% | 11.2% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 5.52e-01 | 94.4% | 82.8% |
| 1sazA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.74 | 56.0 | 3.48e-01 | 83.3% | 73.6% |
| 1qlbA04 | 3.10.20.820 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.71 | 50.0 | 3.70e-01 | 72.2% | 53.2% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 52.0 | 4.02e-01 | 80.6% | 34.5% |
| 4h15A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 53.0 | 3.21e-01 | 83.3% | 11.5% |
| 2fm7A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.70 | 47.0 | 3.99e-01 | 75.0% | 40.3% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.68 | 51.0 | 4.42e-01 | 86.1% | 50.0% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.68 | 47.0 | 4.56e-01 | 72.2% | 65.9% |
| 4hjhA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.66 | 50.0 | 3.70e-01 | 94.4% | 100.0% |
| 1ed1A00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.66 | 51.0 | 3.66e-01 | 88.9% | 78.9% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.65 | 55.0 | 3.33e-01 | 91.7% | 95.0% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.24e-01 | 91.7% | 58.3% |
| 3m62B00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 44.0 | 3.59e-01 | 75.0% | 72.2% |
| 1mgtA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 3.35e-01 | 75.0% | 43.2% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.60 | 42.0 | 3.30e-01 | 75.0% | 31.1% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 46.0 | 3.77e-01 | 86.1% | 47.2% |
| 1tuoA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.57 | 45.0 | 3.34e-01 | 94.4% | 94.9% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.56 | 41.0 | 3.95e-01 | 94.4% | 70.8% |
| 3vtfA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 42.0 | 2.75e-01 | 91.7% | 32.2% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 41.0 | 3.66e-01 | 91.7% | 68.4% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4632125 | 101.1.11.30 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH | 0.98 | 84.0 | 6.49e-01 | 91.7% | 48.6% |
| 4993165 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.97 | 83.0 | 5.85e-01 | 91.7% | 34.7% |
| 4994233 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.97 | 81.0 | 6.09e-01 | 91.7% | 41.2% |
| 4058428 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.96 | 79.0 | 6.75e-01 | 88.9% | 58.2% |
| 4971448 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.96 | 72.0 | 5.51e-01 | 80.6% | 38.7% |
| 5076430 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.95 | 84.0 | 6.76e-01 | 97.2% | 53.8% |
| 4928595 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.95 | 75.0 | 5.23e-01 | 86.1% | 29.5% |
| 4375217 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.95 | 77.0 | 5.79e-01 | 88.9% | 40.0% |
| 3284512 | 101.1.11.30 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH | 0.94 | 86.0 | 6.73e-01 | 100.0% | 52.9% |
| 5029686 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.94 | 76.0 | 5.86e-01 | 88.9% | 42.7% |
| 5074942 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.94 | 78.0 | 6.04e-01 | 91.7% | 44.0% |
| 4970117 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.94 | 77.0 | 5.65e-01 | 91.7% | 36.7% |
| 3586991 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.93 | 77.0 | 5.87e-01 | 88.9% | 42.7% |
| 1167933 | 101.1.11.5 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Arc | 0.93 | 85.0 | 7.03e-01 | 100.0% | 60.0% |
| 4649369 | 101.1.11.14 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD | 0.93 | 82.0 | 6.62e-01 | 100.0% | 53.8% |
| 2081534 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.93 | 81.0 | 6.41e-01 | 100.0% | 50.0% |
| 3504504 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.93 | 78.0 | 7.98e-01 | 91.7% | 94.3% |
| 4992168 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.93 | 76.0 | 5.49e-01 | 88.9% | 35.6% |
| 3279727 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.92 | 76.0 | 6.81e-01 | 91.7% | 66.0% |
| 5050174 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.92 | 74.0 | 5.52e-01 | 88.9% | 37.6% |
| 2455631 | 101.1.11.11 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1778 | 0.91 | 81.0 | 6.10e-01 | 100.0% | 43.4% |
| 5045263 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.91 | 75.0 | 5.71e-01 | 91.7% | 41.2% |
| 3955846 | 101.1.11.30 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH | 0.91 | 76.0 | 6.13e-01 | 91.7% | 50.8% |
| 3951746 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.91 | 80.0 | 6.27e-01 | 100.0% | 50.7% |
| 3973493 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.91 | 72.0 | 5.89e-01 | 88.9% | 49.2% |
| 3286839 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.90 | 81.0 | 6.39e-01 | 100.0% | 51.4% |
| 3979215 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 69.0 | 5.93e-01 | 83.3% | 54.5% |
| 4980496 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.89 | 74.0 | 4.83e-01 | 94.4% | 23.3% |
| 4506167 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.89 | 67.0 | 3.97e-01 | 80.6% | 12.3% |
| 4017904 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.89 | 66.0 | 5.90e-01 | 80.6% | 58.0% |
| 5050855 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.89 | 75.0 | 6.56e-01 | 100.0% | 63.6% |
| 5033202 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.88 | 76.0 | 5.69e-01 | 100.0% | 41.1% |
| 4979915 | 304.103.1.10 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › DUF2148 | 0.88 | 60.0 | 3.66e-01 | 72.2% | 65.0% |
| 162036 | 101.1.11.28 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › NikA-like | 0.88 | 78.0 | 6.91e-01 | 100.0% | 70.6% |
| 4937892 | 101.1.3.32 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › RHH_1 | 0.86 | 75.0 | 5.44e-01 | 100.0% | 36.0% |
| 5012232 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.86 | 74.0 | 6.50e-01 | 100.0% | 67.3% |
| 4946063 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.86 | 74.0 | 6.38e-01 | 97.2% | 67.3% |
| 3955892 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.85 | 73.0 | 6.54e-01 | 97.2% | 70.0% |
| 3959362 | 101.1.1.531 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › WS_DGAT_cat | 0.85 | 60.0 | 3.86e-01 | 80.6% | 18.0% |
| 5072014 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.85 | 72.0 | 5.75e-01 | 100.0% | 48.0% |
| 4980865 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.85 | 73.0 | 5.66e-01 | 100.0% | 46.3% |
| 5064868 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.84 | 64.0 | 4.82e-01 | 86.1% | 34.4% |
| 4984124 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.84 | 66.0 | 5.54e-01 | 91.7% | 50.8% |
| 4978071 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.83 | 63.0 | 3.61e-01 | 80.6% | 9.3% |
| 3985544 | 101.1.11.65 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RepB-RCR_reg | 0.82 | 68.0 | 6.06e-01 | 100.0% | 65.5% |
| 4946062 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 69.0 | 6.24e-01 | 97.2% | 74.0% |
| 5081457 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 60.0 | 6.23e-01 | 80.6% | 96.7% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.81 | 69.0 | 6.07e-01 | 100.0% | 65.5% |
| 5001070 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.79 | 59.0 | 3.48e-01 | 83.3% | 10.9% |
| 3164403 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.79 | 55.0 | 3.48e-01 | 77.8% | 15.2% |
| 3318879 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 57.0 | 4.74e-01 | 86.1% | 44.6% |
| 3463111 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.77 | 64.0 | 5.41e-01 | 94.4% | 86.7% |
| 4955033 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.77 | 63.0 | 5.48e-01 | 100.0% | 60.0% |
| 3475426 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.76 | 66.0 | 5.34e-01 | 100.0% | 91.4% |
| 5069760 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.76 | 60.0 | 5.32e-01 | 100.0% | 60.0% |
| 3507722 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.75 | 60.0 | 4.56e-01 | 97.2% | 57.9% |
| 3964437 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.74 | 61.0 | 4.46e-01 | 100.0% | 56.4% |
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.74 | 61.0 | 5.43e-01 | 100.0% | 67.3% |
| 3642026 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 52.0 | 4.64e-01 | 80.6% | 50.9% |
| 2074163 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.72 | 54.0 | 3.29e-01 | 83.3% | 27.6% |
| 3343361 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.71 | 53.0 | 5.61e-01 | 86.1% | 100.0% |
| 4073199 | 101.1.11.190 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2610 | 0.70 | 51.0 | 4.89e-01 | 83.3% | 71.1% |
| 3624480 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.70 | 49.0 | 4.49e-01 | 80.6% | 52.7% |
| 4915831 | 6146.2.1.1 ↗ | a+b two layers › Cas3 C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3-like_C | 0.69 | 61.0 | 4.72e-01 | 100.0% | 67.5% |
| 4561787 | 6146.2.1.1 ↗ | a+b two layers › Cas3 C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3-like_C | 0.68 | 57.0 | 4.27e-01 | 100.0% | 53.7% |
| 3504836 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.65 | 50.0 | 3.22e-01 | 88.9% | 61.5% |
| 5031174 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.62 | 48.0 | 3.97e-01 | 86.1% | 55.7% |
| 3669969 | 3781.1.1.0 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain | 0.58 | 40.0 | 3.83e-01 | 83.3% | 58.0% |
| 3241997 | 197.1.1.8 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › PF26570 | 0.58 | 48.0 | 3.86e-01 | 100.0% | 92.5% |