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NC_028777.1__YP_009196900.1__CPT_Stills15__00015
Bact-VirNC_028777.1__YP_009196900.1__CPT_Stills15__00015
Identity
- Accession:
- NC_028777 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Taxonomy
TaxID: 1610833
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-76
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kz0A01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.58 | 34.0 | 3.34e-01 | 71.0% | 50.7% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.50 | 31.0 | 2.64e-01 | 75.8% | 37.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3394655 | 603.1.1.104 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 | 0.53 | 38.0 | 2.45e-01 | 75.8% | 96.7% |
| 3502554 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.53 | 40.0 | 3.96e-01 | 85.5% | 96.9% |
| 3587058 | 605.1.1.10 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › SPOB_a | 0.52 | 28.0 | 2.65e-01 | 88.7% | 38.7% |
| 3238115 | 389.1.1.145 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF29138 | 0.52 | 34.0 | 3.61e-01 | 100.0% | 76.4% |
| 3371431 | 304.116.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › PCRF | 0.52 | 35.0 | 2.92e-01 | 100.0% | 39.1% |
| 4884259 | 2004.1.1.1190 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERG4_ERG24, LSM, DUF1295 | 0.52 | 36.0 | 3.63e-01 | 77.4% | 70.8% |
| 4994987 | 2008.3.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain | 0.51 | 31.0 | 2.67e-01 | 100.0% | 35.2% |
| 4980377 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.50 | 34.0 | 2.48e-01 | 72.6% | 36.2% |
| 3737786 | 580.1.1.1 ↗ | extended segments › Epsilon subunit of mitochondrial F1F0-ATP synthase › Epsilon subunit of mitochondrial F1F0-ATP synthase › Epsilon subunit of mitochondrial F1F0-ATP synthase › ATP-synt_Eps | 0.50 | 30.0 | 3.21e-01 | 87.1% | 67.3% |