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NC_028777.1__YP_009196951.1__CPT_Stills66__00066
Bact-VirNC_028777.1__YP_009196951.1__CPT_Stills66__00066
Identity
- Accession:
- NC_028777 ↗
- Kingdom:
- phage
Quality
86.7
mean pLDDT
Taxonomy
TaxID: 1610833
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-88
Domain cluster:
rep: MG450654.1__ATW62836.1__SCBWM1_gp152__00153__D17-96
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04542.21 best | Sigma70_r2 | 26.7 | 5.30e-06 | 77.4% | 64.8% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 74.0 | 7.05e-01 | 100.0% | 76.0% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.88 | 72.0 | 5.47e-01 | 100.0% | 39.9% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.83 | 72.0 | 7.19e-01 | 100.0% | 90.6% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.82 | 71.0 | 7.24e-01 | 100.0% | 96.2% |
| 5yixA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.79 | 66.0 | 4.34e-01 | 97.6% | 23.1% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.78 | 61.0 | 5.87e-01 | 100.0% | 74.5% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.76 | 69.0 | 4.63e-01 | 100.0% | 78.7% |
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.72 | 58.0 | 5.74e-01 | 100.0% | 84.1% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.65 | 53.0 | 4.54e-01 | 89.3% | 67.4% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.63 | 53.0 | 4.51e-01 | 94.0% | 58.3% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.63 | 46.0 | 4.70e-01 | 92.9% | 80.2% |
| 1n5uA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.62 | 46.0 | 4.58e-01 | 92.9% | 73.3% |
| 2mgyA01 | 1.20.1260.100 | Mainly Alpha › Up-down Bundle › Ferritin › TspO/MBR protein | 0.62 | 52.0 | 4.34e-01 | 97.6% | 91.9% |
| 1n40A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 43.0 | 2.76e-01 | 73.8% | 56.9% |
| 4f0uA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.60 | 53.0 | 4.27e-01 | 96.4% | 78.1% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 45.0 | 4.30e-01 | 83.3% | 80.6% |
| 1ow4A00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.59 | 41.0 | 3.67e-01 | 90.5% | 50.8% |
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 46.0 | 3.43e-01 | 89.3% | 36.7% |
| 1sxjD03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.58 | 38.0 | 3.72e-01 | 84.5% | 60.4% |
| 4i5jA01 | 1.10.238.220 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.57 | 47.0 | 4.34e-01 | 91.7% | 82.6% |
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 46.0 | 3.16e-01 | 100.0% | 92.8% |
| 2wb0X01 | 1.10.269.10 | Mainly Alpha › Orthogonal Bundle › Adenovirus Single-stranded Dna-binding Protein, domain 1 › Adenovirus DNA-binding, N-terminal domain | 0.55 | 44.0 | 3.97e-01 | 86.9% | 93.2% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.54 | 47.0 | 3.18e-01 | 96.4% | 71.7% |
| 8agyA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.54 | 44.0 | 3.27e-01 | 92.9% | 77.0% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 41.0 | 3.55e-01 | 83.3% | 91.2% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.54 | 39.0 | 3.32e-01 | 78.6% | 49.3% |
| 1s7bA00 | 1.10.3730.20 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.53 | 41.0 | 3.83e-01 | 97.6% | 67.0% |
| 3on2A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 42.0 | 3.35e-01 | 89.3% | 68.9% |
| 1k3kA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.53 | 37.0 | 3.13e-01 | 72.6% | 90.4% |
| 3bg2A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.53 | 46.0 | 3.62e-01 | 100.0% | 70.9% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 46.0 | 3.01e-01 | 100.0% | 93.3% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.53 | 44.0 | 3.68e-01 | 95.2% | 99.4% |
| 3gcgB00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.52 | 41.0 | 3.48e-01 | 89.3% | 79.6% |
| 4hstB03 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.51 | 46.0 | 3.98e-01 | 100.0% | 94.6% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.51 | 41.0 | 3.27e-01 | 88.1% | 56.6% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 39.0 | 3.44e-01 | 82.1% | 88.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4524644 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.92 | 76.0 | 5.52e-01 | 100.0% | 35.6% |
| 3838866 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.91 | 75.0 | 4.71e-01 | 100.0% | 19.5% |
| 3664504 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.90 | 74.0 | 5.87e-01 | 100.0% | 46.2% |
| 4484001 | 142.1.1.4 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2,Sigma70_ner | 0.90 | 74.0 | 4.78e-01 | 100.0% | 21.8% |
| 2817644 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.89 | 74.0 | 6.59e-01 | 100.0% | 65.2% |
| 3971939 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.89 | 75.0 | 7.53e-01 | 98.8% | 88.2% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 75.0 | 5.23e-01 | 100.0% | 31.7% |
| 4066835 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.79 | 69.0 | 5.90e-01 | 100.0% | 61.6% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.78 | 67.0 | 4.75e-01 | 100.0% | 31.8% |
| None | — | 0.78 | 67.0 | 4.74e-01 | 100.0% | 31.8% | |
| 4026959 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.77 | 70.0 | 4.62e-01 | 100.0% | 36.4% |
| 5030446 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.74 | 59.0 | 5.94e-01 | 97.6% | 85.9% |
| 5048634 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 58.0 | 5.22e-01 | 96.4% | 69.6% |
| 5055000 | 3896.1.1.2 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase › DUF92 | 0.66 | 58.0 | 4.13e-01 | 98.8% | 75.2% |
| 3700820 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 55.0 | 5.39e-01 | 94.0% | 90.0% |
| 4010426 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.64 | 49.0 | 3.77e-01 | 81.0% | 74.6% |
| 4004545 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.61 | 48.0 | 3.10e-01 | 86.9% | 58.6% |
| 3630520 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.59 | 51.0 | 3.67e-01 | 98.8% | 44.2% |
| 4339023 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.59 | 52.0 | 3.89e-01 | 100.0% | 87.7% |
| 3473992 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.58 | 40.0 | 3.48e-01 | 70.2% | 84.0% |
| 5035908 | 3896.1.2.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase | 0.58 | 50.0 | 4.07e-01 | 100.0% | 48.8% |
| 3953850 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.58 | 50.0 | 3.86e-01 | 96.4% | 84.6% |
| 3619120 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.58 | 50.0 | 3.61e-01 | 100.0% | 72.1% |
| 3741214 | 5051.1.1.9 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Transp_cyt_pur | 0.57 | 47.0 | 2.99e-01 | 94.0% | 77.9% |
| 3200574 | 601.1.2.81 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Serinc | 0.57 | 46.0 | 4.14e-01 | 91.7% | 85.8% |
| 4424436 | 604.39.1.6 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT | 0.56 | 45.0 | 3.71e-01 | 91.7% | 46.7% |
| 4358684 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.56 | 39.0 | 3.12e-01 | 73.8% | 89.4% |
| 3214561 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.56 | 44.0 | 3.48e-01 | 88.1% | 56.8% |
| 3862192 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.55 | 45.0 | 3.19e-01 | 91.7% | 40.3% |
| None | — | 0.55 | 47.0 | 3.43e-01 | 100.0% | 44.2% | |
| 3291489 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.55 | 47.0 | 4.07e-01 | 97.6% | 64.4% |
| 3510536 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.55 | 45.0 | 4.02e-01 | 90.5% | 96.7% |
| 3805445 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 38.0 | 3.03e-01 | 73.8% | 77.7% |
| 3504717 | 106.1.1.8 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like | 0.53 | 45.0 | 3.88e-01 | 97.6% | 87.6% |
| 3965546 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.53 | 42.0 | 3.79e-01 | 86.9% | 98.3% |
| 4136484 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.52 | 43.0 | 2.94e-01 | 88.1% | 43.8% |
| 3646986 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.52 | 42.0 | 3.68e-01 | 86.9% | 90.4% |
| 3200192 | 3543.1.1.1 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › Gpr1_Fun34_YaaH | 0.52 | 38.0 | 2.92e-01 | 77.4% | 85.0% |
| 3253939 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 35.0 | 3.17e-01 | 70.2% | 79.2% |
D2
high
residues 97-139
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 73.0 | 6.06e-01 | 97.7% | 66.7% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 70.0 | 4.88e-01 | 93.0% | 31.3% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 73.0 | 6.13e-01 | 100.0% | 63.9% |
| 2pjpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 70.0 | 6.35e-01 | 100.0% | 73.3% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 73.0 | 5.73e-01 | 100.0% | 57.6% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.80 | 68.0 | 5.75e-01 | 100.0% | 63.2% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 64.0 | 5.02e-01 | 93.0% | 44.7% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 5.66e-01 | 100.0% | 61.7% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 65.0 | 5.13e-01 | 95.3% | 55.4% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 5.13e-01 | 90.7% | 67.9% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 5.80e-01 | 95.3% | 69.8% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 70.0 | 5.73e-01 | 100.0% | 65.8% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 5.70e-01 | 95.3% | 62.1% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 4.63e-01 | 100.0% | 50.0% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 4.44e-01 | 95.3% | 28.5% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 66.0 | 5.73e-01 | 97.7% | 66.7% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 67.0 | 4.58e-01 | 100.0% | 32.2% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 64.0 | 5.89e-01 | 93.0% | 73.2% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.77 | 68.0 | 5.12e-01 | 97.7% | 45.8% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 59.0 | 5.86e-01 | 88.4% | 100.0% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 67.0 | 4.76e-01 | 100.0% | 38.0% |
| 1xd7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 4.78e-01 | 100.0% | 37.9% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 5.72e-01 | 100.0% | 66.7% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.76 | 65.0 | 4.68e-01 | 100.0% | 34.9% |
| 1hsjB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 5.22e-01 | 100.0% | 58.1% |
| 3eetA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 66.0 | 5.80e-01 | 100.0% | 80.0% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.14e-01 | 100.0% | 54.0% |
| 2yveB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.74 | 60.0 | 3.96e-01 | 90.7% | 27.3% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 60.0 | 4.47e-01 | 100.0% | 38.4% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 64.0 | 5.96e-01 | 100.0% | 92.7% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.73 | 63.0 | 4.77e-01 | 97.7% | 44.6% |
| 5k7fA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 53.0 | 5.40e-01 | 79.1% | 100.0% |
| 1rktA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 58.0 | 5.44e-01 | 90.7% | 92.5% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 63.0 | 5.27e-01 | 97.7% | 63.9% |
| 3h5aD01 | 3.90.930.70 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.72 | 58.0 | 4.82e-01 | 100.0% | 51.1% |
| 2g7sA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 60.0 | 3.96e-01 | 97.7% | 26.3% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 4.97e-01 | 100.0% | 61.2% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 59.0 | 4.27e-01 | 100.0% | 35.1% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 56.0 | 4.81e-01 | 88.4% | 62.9% |
| 3ljlA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 61.0 | 4.23e-01 | 100.0% | 36.9% |
| 3on4D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 57.0 | 3.73e-01 | 90.7% | 27.6% |
| 2gfnA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 57.0 | 3.69e-01 | 90.7% | 25.5% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 56.0 | 5.47e-01 | 90.7% | 100.0% |
| 3cwrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 58.0 | 3.83e-01 | 97.7% | 58.9% |
| 3mnlB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 59.0 | 3.92e-01 | 100.0% | 63.2% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.70 | 58.0 | 5.34e-01 | 95.3% | 75.0% |
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 3.85e-01 | 97.7% | 59.3% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 52.0 | 5.12e-01 | 88.4% | 95.8% |
| 7e1lB01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 54.0 | 3.54e-01 | 90.7% | 24.6% |
| 5gp9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 55.0 | 5.43e-01 | 93.0% | 95.8% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.69 | 59.0 | 3.86e-01 | 100.0% | 56.3% |
| 3cdlA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 57.0 | 5.40e-01 | 97.7% | 92.6% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 55.0 | 3.70e-01 | 97.7% | 27.2% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 56.0 | 3.72e-01 | 97.7% | 58.1% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 56.0 | 4.67e-01 | 100.0% | 65.9% |
| 3c2bA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 54.0 | 5.14e-01 | 93.0% | 98.1% |
| 2id3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 51.0 | 5.01e-01 | 90.7% | 95.9% |
| 3vokA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 55.0 | 3.68e-01 | 93.0% | 30.7% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 54.0 | 3.64e-01 | 95.3% | 27.7% |
| 2qwtA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 54.0 | 3.71e-01 | 97.7% | 30.5% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 55.0 | 3.66e-01 | 97.7% | 26.9% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 55.0 | 3.64e-01 | 100.0% | 56.6% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 55.0 | 5.07e-01 | 97.7% | 89.7% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 54.0 | 3.55e-01 | 97.7% | 25.2% |
| 2iaiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 49.0 | 4.32e-01 | 81.4% | 69.2% |
| 4me9B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 52.0 | 3.48e-01 | 93.0% | 28.0% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.65 | 53.0 | 4.76e-01 | 100.0% | 73.1% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 53.0 | 3.58e-01 | 97.7% | 27.9% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.64 | 50.0 | 4.95e-01 | 90.7% | 84.8% |
| 2f07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 53.0 | 3.47e-01 | 97.7% | 26.5% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.64 | 49.0 | 4.46e-01 | 100.0% | 64.3% |
| 2d6yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 51.0 | 3.45e-01 | 97.7% | 27.4% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 4.20e-01 | 100.0% | 57.6% |
| 2hxoA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 50.0 | 4.53e-01 | 95.3% | 74.6% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 51.0 | 4.34e-01 | 100.0% | 66.7% |
| 2bgwA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.61 | 48.0 | 4.22e-01 | 95.3% | 68.9% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 48.0 | 3.83e-01 | 100.0% | 44.2% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 50.0 | 3.81e-01 | 100.0% | 77.5% |
| 1r4aE00 | 1.10.220.60 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › GRIP domain | 0.57 | 40.0 | 3.86e-01 | 76.7% | 74.5% |
| 3kkdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 41.0 | 2.85e-01 | 100.0% | 24.7% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3347305 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.85 | 76.0 | 4.99e-01 | 100.0% | 30.3% |
| 3350525 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.84 | 75.0 | 6.54e-01 | 100.0% | 76.9% |
| 3650286 | 101.1.2.454 ↗ | alpha arrays › HTH › HTH › winged helix domain › FAM91_N | 0.84 | 74.0 | 7.08e-01 | 100.0% | 86.0% |
| 3439644 | 101.1.2.454 ↗ | alpha arrays › HTH › HTH › winged helix domain › FAM91_N | 0.84 | 74.0 | 4.39e-01 | 100.0% | 14.3% |
| 4938492 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 68.0 | 5.54e-01 | 90.7% | 53.8% |
| 4966047 | 101.1.2.915 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6432 | 0.83 | 74.0 | 5.65e-01 | 100.0% | 49.5% |
| 3963361 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.83 | 73.0 | 6.14e-01 | 97.7% | 64.3% |
| 4983915 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 72.0 | 5.26e-01 | 100.0% | 39.1% |
| 3295746 | 101.1.2.454 ↗ | alpha arrays › HTH › HTH › winged helix domain › FAM91_N | 0.83 | 71.0 | 5.98e-01 | 100.0% | 57.3% |
| 4929927 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 67.0 | 4.99e-01 | 90.7% | 41.0% |
| 3725940 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.82 | 71.0 | 5.59e-01 | 95.3% | 52.9% |
| 3679768 | 101.1.2.454 ↗ | alpha arrays › HTH › HTH › winged helix domain › FAM91_N | 0.82 | 71.0 | 4.85e-01 | 100.0% | 28.7% |
| 3991629 | 101.1.6.22 ↗ | alpha arrays › HTH › HTH › TrpR › FAM91_N | 0.81 | 71.0 | 4.19e-01 | 100.0% | 13.7% |
| 3404575 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.81 | 68.0 | 5.28e-01 | 93.0% | 50.0% |
| 5021231 | 101.1.1.544 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 | 0.81 | 72.0 | 5.70e-01 | 100.0% | 84.7% |
| 3377246 | 101.1.3.19 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › FAM91_N | 0.81 | 70.0 | 4.16e-01 | 100.0% | 14.1% |
| 5018467 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 65.0 | 5.07e-01 | 90.7% | 46.2% |
| 3576188 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.80 | 70.0 | 5.44e-01 | 97.7% | 54.4% |
| 4948834 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 6.42e-01 | 90.7% | 97.7% |
| 4957080 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 66.0 | 6.21e-01 | 100.0% | 85.5% |
| 5010519 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.78 | 68.0 | 5.29e-01 | 100.0% | 56.8% |
| 4944329 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 65.0 | 6.26e-01 | 97.7% | 82.0% |
| 4996857 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 68.0 | 6.15e-01 | 100.0% | 72.9% |
| 4998375 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 5.32e-01 | 100.0% | 49.4% |
| 3943561 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 67.0 | 5.31e-01 | 100.0% | 53.3% |
| 4941224 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 68.0 | 5.52e-01 | 100.0% | 55.0% |
| 5044589 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 65.0 | 5.81e-01 | 100.0% | 67.7% |
| 4929958 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.77 | 67.0 | 4.85e-01 | 100.0% | 38.7% |
| 4928999 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 68.0 | 5.31e-01 | 100.0% | 51.1% |
| 4929094 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.77 | 66.0 | 5.26e-01 | 100.0% | 51.1% |
| 3578615 | 101.1.1.302 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › FAM91_N | 0.77 | 66.0 | 4.87e-01 | 100.0% | 37.4% |
| 5071936 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 66.0 | 5.52e-01 | 100.0% | 57.3% |
| 3279602 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 67.0 | 6.00e-01 | 100.0% | 81.7% |
| None | — | 0.76 | 68.0 | 5.50e-01 | 100.0% | 65.0% | |
| 5061235 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.76 | 67.0 | 4.15e-01 | 100.0% | 20.1% |
| 4928483 | 101.1.3.36 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_23 | 0.76 | 62.0 | 4.71e-01 | 93.0% | 40.8% |
| 3604669 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 60.0 | 5.57e-01 | 90.7% | 69.1% |
| 4954701 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.75 | 65.0 | 4.91e-01 | 100.0% | 51.4% |
| 5057571 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.75 | 65.0 | 5.15e-01 | 100.0% | 52.2% |
| 3587265 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 59.0 | 4.66e-01 | 90.7% | 53.7% |
| 3989015 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 62.0 | 4.68e-01 | 95.3% | 45.7% |
| 4529157 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.74 | 65.0 | 5.05e-01 | 97.7% | 52.2% |
| 5076135 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 56.0 | 5.07e-01 | 83.7% | 68.3% |
| 4180255 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.74 | 61.0 | 4.89e-01 | 100.0% | 48.4% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 64.0 | 6.17e-01 | 100.0% | 88.0% |
| 4624269 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 66.0 | 5.86e-01 | 100.0% | 75.0% |
| 4102958 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.73 | 60.0 | 5.25e-01 | 93.0% | 66.2% |
| 4940742 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.73 | 62.0 | 5.04e-01 | 100.0% | 55.3% |
| 3960831 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.72 | 63.0 | 4.09e-01 | 100.0% | 56.6% |
| 4982265 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 57.0 | 4.76e-01 | 88.4% | 62.7% |
| 4934146 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 61.0 | 5.21e-01 | 100.0% | 58.6% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.72 | 58.0 | 4.42e-01 | 90.7% | 41.0% |
| 5016436 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 56.0 | 4.83e-01 | 88.4% | 67.1% |
| 3958071 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.07e-01 | 97.7% | 69.3% |
| 2541 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 60.0 | 5.12e-01 | 97.7% | 67.6% |
| 3284909 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 60.0 | 4.97e-01 | 97.7% | 65.0% |
| 4975400 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.71 | 61.0 | 4.50e-01 | 100.0% | 47.8% |
| 3288092 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 61.0 | 4.74e-01 | 97.7% | 54.7% |
| 3280318 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 54.0 | 4.80e-01 | 86.0% | 70.8% |
| 4174590 | 101.1.2.61 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 | 0.71 | 61.0 | 5.39e-01 | 100.0% | 78.5% |
| 3284035 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 59.0 | 5.12e-01 | 97.7% | 74.3% |
| 4970178 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.70 | 55.0 | 4.92e-01 | 90.7% | 66.2% |
| 5067054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 60.0 | 5.36e-01 | 95.3% | 81.7% |
| 198429 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 5.07e-01 | 95.3% | 73.1% |
| 3287457 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 4.88e-01 | 97.7% | 65.0% |
| 4965811 | 101.1.1.559 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 | 0.70 | 59.0 | 5.41e-01 | 100.0% | 76.7% |
| 3960034 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 4.60e-01 | 97.7% | 55.8% |
| 3660305 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.70 | 60.0 | 5.73e-01 | 97.7% | 98.0% |
| 4456687 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 4.20e-01 | 97.7% | 41.1% |
| 3282201 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 63.0 | 5.45e-01 | 100.0% | 83.1% |
| 5073390 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.70 | 59.0 | 4.30e-01 | 100.0% | 44.0% |
| 3691115 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.70 | 58.0 | 5.78e-01 | 100.0% | 97.8% |
| 4067437 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 57.0 | 4.90e-01 | 97.7% | 69.3% |
| 3340398 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.70 | 59.0 | 4.19e-01 | 97.7% | 35.6% |
| 3954425 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 62.0 | 4.82e-01 | 100.0% | 60.0% |
| 3365751 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.69 | 59.0 | 5.18e-01 | 97.7% | 75.4% |
| 3973750 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 4.88e-01 | 97.7% | 66.7% |
| 5001331 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 59.0 | 4.37e-01 | 100.0% | 45.2% |
| 3960205 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 4.79e-01 | 97.7% | 62.5% |
| 4068173 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 4.84e-01 | 97.7% | 66.7% |
| 3280043 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.05e-01 | 100.0% | 84.3% |
| 4944795 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 57.0 | 5.07e-01 | 97.7% | 81.5% |
| 3282753 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 4.41e-01 | 97.7% | 52.0% |
| 3969490 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 58.0 | 5.02e-01 | 100.0% | 80.0% |
| 386667 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 4.68e-01 | 97.7% | 60.7% |
| 3281267 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 55.0 | 3.68e-01 | 97.7% | 27.4% |
| 4937972 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.67 | 55.0 | 3.48e-01 | 100.0% | 39.3% |
| 3977556 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 53.0 | 4.97e-01 | 90.7% | 87.3% |
| 4028664 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 51.0 | 4.22e-01 | 100.0% | 70.5% |
| 4010677 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.65 | 49.0 | 3.90e-01 | 88.4% | 47.0% |
| 3943173 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 51.0 | 4.99e-01 | 97.7% | 98.0% |
| 4151588 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 49.0 | 4.74e-01 | 88.4% | 94.0% |
| 3972891 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.63 | 48.0 | 3.85e-01 | 90.7% | 45.0% |
| 4020317 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 47.0 | 3.89e-01 | 100.0% | 49.0% |
| 4996152 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.62 | 51.0 | 4.11e-01 | 97.7% | 58.9% |
| 3974513 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 45.0 | 4.49e-01 | 100.0% | 97.8% |
| 3777242 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.56 | 43.0 | 3.39e-01 | 100.0% | 72.5% |
| 3993676 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.52 | 43.0 | 3.42e-01 | 100.0% | 80.0% |
D3
high
residues 169-228
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04545.23 best | Sigma70_r4 | 27.2 | 3.00e-06 | 75.0% | 82.0% |
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.93 | 83.0 | 7.71e-01 | 96.7% | 79.2% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.93 | 63.0 | 6.41e-01 | 71.7% | 72.4% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 69.0 | 7.07e-01 | 81.7% | 94.8% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 70.0 | 6.72e-01 | 83.3% | 83.6% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 68.0 | 6.12e-01 | 88.3% | 62.5% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 79.0 | 7.13e-01 | 100.0% | 75.0% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.87 | 56.0 | 5.80e-01 | 70.0% | 71.4% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 76.0 | 7.63e-01 | 96.7% | 96.7% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 78.0 | 7.70e-01 | 100.0% | 95.3% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 63.0 | 6.52e-01 | 76.7% | 92.9% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 66.0 | 6.33e-01 | 83.3% | 83.6% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 74.0 | 7.22e-01 | 100.0% | 90.8% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 55.0 | 5.98e-01 | 71.7% | 82.4% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 62.0 | 6.52e-01 | 80.0% | 88.9% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.81 | 72.0 | 5.45e-01 | 100.0% | 43.3% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 70.0 | 5.74e-01 | 98.3% | 54.3% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 54.0 | 5.85e-01 | 70.0% | 88.0% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 56.0 | 5.45e-01 | 75.0% | 66.7% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 57.0 | 5.57e-01 | 75.0% | 71.9% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 60.0 | 6.30e-01 | 83.3% | 89.1% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 71.0 | 6.99e-01 | 100.0% | 95.2% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 72.0 | 6.64e-01 | 100.0% | 88.0% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.79 | 69.0 | 4.68e-01 | 96.7% | 28.2% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 6.20e-01 | 86.7% | 88.9% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 56.0 | 5.89e-01 | 76.7% | 88.9% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 69.0 | 6.95e-01 | 98.3% | 98.3% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 60.0 | 5.20e-01 | 85.0% | 55.1% |
| 2ijlB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 61.0 | 4.97e-01 | 85.0% | 63.3% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 52.0 | 5.43e-01 | 70.0% | 87.3% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 53.0 | 5.45e-01 | 73.3% | 76.8% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.77 | 56.0 | 5.43e-01 | 78.3% | 70.6% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 68.0 | 6.32e-01 | 100.0% | 89.5% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.76 | 64.0 | 5.00e-01 | 95.0% | 45.8% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 56.0 | 5.52e-01 | 78.3% | 100.0% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 4.93e-01 | 75.0% | 62.7% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 54.0 | 5.08e-01 | 75.0% | 66.2% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.74 | 54.0 | 4.20e-01 | 78.3% | 36.5% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 48.0 | 4.43e-01 | 70.0% | 52.6% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 55.0 | 5.41e-01 | 80.0% | 100.0% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.74 | 51.0 | 3.76e-01 | 73.3% | 53.5% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.25e-01 | 75.0% | 75.9% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 66.0 | 5.79e-01 | 98.3% | 70.1% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 51.0 | 4.90e-01 | 73.3% | 62.9% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.88e-01 | 81.7% | 69.3% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 5.05e-01 | 75.0% | 73.0% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 4.19e-01 | 80.0% | 48.8% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 55.0 | 5.91e-01 | 81.7% | 98.0% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 65.0 | 6.18e-01 | 98.3% | 87.1% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 61.0 | 5.38e-01 | 98.3% | 63.8% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 4.75e-01 | 78.3% | 81.2% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 47.0 | 5.29e-01 | 73.3% | 95.5% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 53.0 | 4.86e-01 | 80.0% | 79.5% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.41e-01 | 81.7% | 73.1% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 53.0 | 4.77e-01 | 80.0% | 84.0% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 4.68e-01 | 88.3% | 55.9% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 61.0 | 3.98e-01 | 100.0% | 36.3% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.12e-01 | 85.0% | 48.5% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 46.0 | 4.35e-01 | 70.0% | 60.0% |
| 2k9qA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 42.0 | 4.95e-01 | 78.3% | 95.0% |
| 3vuqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 45.0 | 3.27e-01 | 100.0% | 24.4% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 50.0 | 4.75e-01 | 85.0% | 70.4% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.45e-01 | 86.7% | 74.2% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.64 | 46.0 | 4.04e-01 | 78.3% | 49.0% |
| 5hxgB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.63 | 43.0 | 4.29e-01 | 80.0% | 67.7% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 47.0 | 4.20e-01 | 80.0% | 81.7% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 44.0 | 4.16e-01 | 98.3% | 62.3% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 41.0 | 2.97e-01 | 80.0% | 57.6% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3706139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.96 | 68.0 | 7.43e-01 | 75.0% | 88.0% |
| 4034200 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.94 | 87.0 | 8.44e-01 | 100.0% | 90.8% |
| 3701286 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.94 | 69.0 | 7.58e-01 | 78.3% | 92.0% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 86.0 | 7.90e-01 | 100.0% | 78.7% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 71.0 | 6.93e-01 | 81.7% | 73.8% |
| 3283074 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.92 | 82.0 | 7.19e-01 | 96.7% | 67.1% |
| 3942478 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.92 | 68.0 | 7.10e-01 | 78.3% | 83.6% |
| 4960928 | 101.1.3.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 | 0.92 | 70.0 | 7.01e-01 | 81.7% | 80.0% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 62.0 | 5.39e-01 | 75.0% | 49.4% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 67.0 | 7.32e-01 | 78.3% | 92.0% |
| 3974013 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 71.0 | 7.11e-01 | 83.3% | 81.7% |
| 138024 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 73.0 | 6.98e-01 | 91.7% | 75.0% |
| 3959252 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 80.0 | 8.09e-01 | 95.0% | 95.0% |
| 4303963 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 83.0 | 7.64e-01 | 100.0% | 80.0% |
| 4237551 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 82.0 | 6.95e-01 | 100.0% | 63.2% |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.90 | 67.0 | 6.32e-01 | 80.0% | 67.1% |
| 4289285 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 82.0 | 7.08e-01 | 100.0% | 66.7% |
| 3951829 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 82.0 | 7.23e-01 | 100.0% | 70.6% |
| 3589532 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 82.0 | 6.79e-01 | 100.0% | 60.2% |
| 4131887 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 77.0 | 6.98e-01 | 96.7% | 70.9% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 81.0 | 7.93e-01 | 100.0% | 92.3% |
| 4578719 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 72.0 | 7.11e-01 | 90.0% | 82.5% |
| 3971665 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 81.0 | 7.49e-01 | 100.0% | 81.3% |
| 3284011 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 81.0 | 7.64e-01 | 100.0% | 85.7% |
| 3288310 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 72.0 | 6.77e-01 | 91.7% | 74.3% |
| 4947436 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 69.0 | 7.22e-01 | 86.7% | 90.9% |
| 3288090 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.88 | 80.0 | 7.59e-01 | 100.0% | 85.7% |
| 3973360 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 80.0 | 7.57e-01 | 100.0% | 85.7% |
| 3282225 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 80.0 | 7.19e-01 | 100.0% | 75.0% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.87 | 80.0 | 5.19e-01 | 100.0% | 25.0% |
| 3969325 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 80.0 | 7.58e-01 | 100.0% | 87.1% |
| 4160122 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.87 | 80.0 | 5.81e-01 | 100.0% | 40.0% |
| 4031363 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 77.0 | 7.55e-01 | 98.3% | 89.2% |
| 4946254 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 58.0 | 6.62e-01 | 71.7% | 93.3% |
| 3280235 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 68.0 | 6.26e-01 | 85.0% | 66.7% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 79.0 | 7.29e-01 | 100.0% | 80.0% |
| 4944887 | 101.1.1.546 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ThiN | 0.86 | 64.0 | 4.99e-01 | 78.3% | 39.2% |
| 4395758 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 74.0 | 6.67e-01 | 95.0% | 70.0% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.86 | 78.0 | 7.84e-01 | 100.0% | 98.3% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 67.0 | 6.70e-01 | 81.7% | 91.7% |
| 4148347 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.86 | 75.0 | 6.15e-01 | 96.7% | 54.8% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 78.0 | 7.01e-01 | 100.0% | 76.2% |
| 3962552 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.85 | 73.0 | 6.78e-01 | 95.0% | 74.7% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.85 | 77.0 | 5.67e-01 | 100.0% | 40.0% |
| 3278040 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 56.0 | 5.65e-01 | 73.3% | 68.3% |
| 4551350 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.85 | 74.0 | 6.26e-01 | 95.0% | 60.0% |
| 3953111 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 64.0 | 6.09e-01 | 80.0% | 77.1% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.85 | 77.0 | 4.97e-01 | 100.0% | 23.6% |
| 3972270 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.84 | 70.0 | 6.62e-01 | 91.7% | 77.1% |
| 4037682 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.84 | 74.0 | 6.11e-01 | 98.3% | 57.0% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 75.0 | 5.18e-01 | 98.3% | 32.2% |
| 5007028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.84 | 60.0 | 6.22e-01 | 76.7% | 81.8% |
| 3587538 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 76.0 | 7.29e-01 | 100.0% | 88.2% |
| 3597464 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 64.0 | 6.46e-01 | 80.0% | 83.3% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 75.0 | 6.29e-01 | 100.0% | 69.0% |
| 3972272 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 69.0 | 6.35e-01 | 88.3% | 77.3% |
| 3991300 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 55.0 | 4.95e-01 | 73.3% | 51.2% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.83 | 56.0 | 5.47e-01 | 73.3% | 64.6% |
| 3968151 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.83 | 72.0 | 6.37e-01 | 96.7% | 67.1% |
| 3945880 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.83 | 60.0 | 6.25e-01 | 78.3% | 83.6% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.83 | 59.0 | 5.47e-01 | 76.7% | 60.0% |
| 3286659 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.82 | 72.0 | 6.81e-01 | 93.3% | 94.3% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 58.0 | 5.82e-01 | 75.0% | 73.3% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.82 | 75.0 | 6.86e-01 | 98.3% | 92.0% |
| 4321251 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 68.0 | 6.10e-01 | 88.3% | 75.9% |
| 4071326 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 66.0 | 5.95e-01 | 86.7% | 71.2% |
| 4007717 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 71.0 | 6.37e-01 | 93.3% | 78.8% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.81 | 72.0 | 6.55e-01 | 100.0% | 75.0% |
| 4683276 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.81 | 74.0 | 6.28e-01 | 100.0% | 65.3% |
| 3973615 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.80 | 55.0 | 5.41e-01 | 71.7% | 66.2% |
| 3971990 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.80 | 71.0 | 6.26e-01 | 96.7% | 69.4% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 58.0 | 5.87e-01 | 78.3% | 76.7% |
| 3979166 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.79 | 69.0 | 6.57e-01 | 95.0% | 82.9% |
| 4460997 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.79 | 53.0 | 6.01e-01 | 70.0% | 95.6% |
| 4470400 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 68.0 | 6.53e-01 | 98.3% | 95.7% |
| 4214308 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.78 | 68.0 | 6.14e-01 | 100.0% | 71.8% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.78 | 65.0 | 5.74e-01 | 90.0% | 70.6% |
| 3948900 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.78 | 64.0 | 5.94e-01 | 88.3% | 78.7% |
| 4458444 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.77 | 67.0 | 5.83e-01 | 100.0% | 64.2% |
| 3718418 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 5.67e-01 | 88.3% | 85.9% |
| 3980681 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.77 | 69.0 | 6.20e-01 | 96.7% | 82.5% |
| 2332937 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.76 | 68.0 | 6.36e-01 | 100.0% | 90.5% |
| 4937081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 68.0 | 6.61e-01 | 100.0% | 90.8% |
| 2761 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.73 | 66.0 | 5.79e-01 | 98.3% | 70.1% |
| 3632861 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 50.0 | 5.49e-01 | 73.3% | 95.6% |
| 5070354 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.73 | 62.0 | 5.68e-01 | 95.0% | 78.8% |
| 3958096 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 52.0 | 4.60e-01 | 78.3% | 52.2% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.71 | 61.0 | 6.00e-01 | 95.0% | 95.4% |
| 5004314 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.70 | 61.0 | 5.63e-01 | 95.0% | 82.7% |
| 4968313 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.70 | 60.0 | 5.46e-01 | 95.0% | 81.2% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.70 | 59.0 | 4.97e-01 | 93.3% | 84.0% |
| 3799849 | 101.1.1.161 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › NPR2 | 0.70 | 55.0 | 5.53e-01 | 88.3% | 88.3% |
| 5041148 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 59.0 | 5.66e-01 | 100.0% | 85.7% |
| 5061940 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 48.0 | 4.94e-01 | 76.7% | 83.6% |
| 3625739 | 101.1.1.161 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › NPR2 | 0.66 | 53.0 | 4.19e-01 | 91.7% | 40.7% |
| 5047812 | 101.29.1.0 ↗ | alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like | 0.66 | 48.0 | 4.88e-01 | 78.3% | 85.0% |