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NC_028805.1__YP_009199103.1__AVV11_gp149__00042

Bact-Vir

NC_028805.1__YP_009199103.1__AVV11_gp149__00042

Identity

Accession:
NC_028805 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jenstvirus› Brevibacillus_phage_Jenst

TaxID: 1691954

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-34_227-287_325-348
PDB
Domain cluster: rep: NC_028805.1__YP_009199102.1__AVV11_gp150__00041__D288-344_532-557_609-626
D2 medium residues 35-226_288-324
PDB
Domain cluster: rep: NC_028805.1__YP_009199102.1__AVV11_gp150__00041__D13-51_121-287_477-531
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.56 25.0 3.50e-01 98.7% 81.4%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.54 26.0 3.25e-01 98.7% 72.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3203571 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.55 27.0 3.43e-01 98.7% 75.7%
5018057 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.54 26.0 3.44e-01 98.7% 82.9%
D3 medium residues 349-486
PDB
Domain cluster: rep: MW749003.1__QXN70274.1__INTERNEXUS_234__00233__D1-28_250-353
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4259247 1.11.1.1 ↗ beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 0.54 32.0 3.68e-01 70.3% 80.8%