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NC_028805.1__YP_009199161.1__AVV11_gp091__00100
Bact-VirNC_028805.1__YP_009199161.1__AVV11_gp091__00100
Identity
- Accession:
- NC_028805 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 1691954
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-79
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 37.0 | 3.25e-01 | 80.0% | 39.8% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 43.0 | 3.04e-01 | 84.3% | 70.5% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.56 | 39.0 | 4.03e-01 | 75.7% | 88.2% |
| 2wnhA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.55 | 46.0 | 2.93e-01 | 95.7% | 89.7% |
| 1i07A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 33.0 | 3.58e-01 | 81.4% | 74.6% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 3.08e-01 | 90.0% | 76.0% |
| 3ieyB00 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 38.0 | 3.10e-01 | 85.7% | 62.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3717029 | 109.4.1.116 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc | 0.74 | 51.0 | 3.01e-01 | 71.4% | 40.0% |
| 4002132 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.66 | 54.0 | 3.44e-01 | 87.1% | 48.9% |
| 3321517 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.64 | 48.0 | 2.96e-01 | 80.0% | 14.6% |
| 3914648 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 47.0 | 3.25e-01 | 81.4% | 46.0% |
| 3626609 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.60 | 28.0 | 3.42e-01 | 72.9% | 66.7% |
| 4212883 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.59 | 42.0 | 3.08e-01 | 77.1% | 79.5% |
| 4067342 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.58 | 51.0 | 3.26e-01 | 98.6% | 47.6% |
| 3405744 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.58 | 51.0 | 3.10e-01 | 95.7% | 31.3% |
| 3853273 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.56 | 27.0 | 3.12e-01 | 72.9% | 62.0% |
| 4828613 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.55 | 45.0 | 4.29e-01 | 87.1% | 88.9% |
| 4944882 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.54 | 32.0 | 3.65e-01 | 81.4% | 82.0% |
| 4068568 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.54 | 41.0 | 2.81e-01 | 80.0% | 49.0% |
| 3587130 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.54 | 31.0 | 3.19e-01 | 81.4% | 55.7% |
| 3919355 | 109.4.1.116 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc | 0.53 | 48.0 | 2.99e-01 | 98.6% | 53.5% |
| 3724868 | 2008.1.1.82 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 | 0.53 | 44.0 | 3.28e-01 | 97.1% | 82.9% |
| 3627409 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.52 | 44.0 | 3.19e-01 | 92.9% | 76.5% |
| 5031154 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 32.0 | 3.36e-01 | 81.4% | 68.3% |
| 3998038 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.52 | 28.0 | 3.14e-01 | 72.9% | 67.3% |
| 4028937 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.52 | 45.0 | 2.54e-01 | 94.3% | 11.8% |
| 3318217 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.51 | 41.0 | 3.91e-01 | 85.7% | 75.0% |