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NC_028805.1__YP_009199172.1__AVV11_gp080__00111

Bact-Vir

NC_028805.1__YP_009199172.1__AVV11_gp080__00111

Identity

Accession:
NC_028805 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-101
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dk4A00 4.10.280.110 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Pre-mRNA processing factor 4 domain 0.64 34.0 3.16e-01 75.0% 39.5%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.52 37.0 2.58e-01 80.0% 73.0%
2losA00 1.10.10.1740 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like 0.51 37.0 3.11e-01 80.0% 55.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4882929 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.70 37.0 3.64e-01 88.3% 46.2%