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NC_028805.1__YP_009199200.1__AVV11_gp052__00139

Bact-Vir

Identity

Accession:: NC_028805 ↗
Kingdom:: phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jenstvirus› Brevibacillus_phage_Jenst

TaxID: 1691954

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-170

PDB

Domain cluster: rep: SRR1747023_scaffold_5_prodigal-single.1__X__X__00220__D6-190

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3a5zB01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.82	28.0	4.30e-01	76.4%	73.0%
6s8zA01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.69	26.0	3.77e-01	76.4%	75.8%
3oyyA01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.67	25.0	3.55e-01	76.4%	69.7%
1uebA01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.66	25.0	3.67e-01	76.4%	76.2%
3cpfA01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.66	24.0	3.45e-01	76.4%	69.2%
2qkdA01	2.20.25.420	Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain	0.54	16.0	2.74e-01	77.1%	72.9%
2f4iA02	2.40.50.420	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain	0.54	30.0	3.34e-01	77.1%	67.8%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5021275	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.77	53.0	5.99e-01	77.1%	91.8%
4135259	4.1.1.57 ↗	beta barrels › SH3 › SH3 › SH3 › EFP_N	0.76	27.0	4.04e-01	77.1%	72.3%
5002173	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.76	43.0	5.31e-01	78.5%	88.9%
4028885	4.1.1.57 ↗	beta barrels › SH3 › SH3 › SH3 › EFP_N	0.75	27.0	3.97e-01	76.4%	72.3%
3643549	4.1.1.139 ↗	beta barrels › SH3 › SH3 › SH3 › IF5A-like_N	0.67	26.0	3.36e-01	75.7%	60.0%
4683474	2.1.1.57 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N	0.58	30.0	3.88e-01	77.1%	88.7%
3387410	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.57	35.0	3.85e-01	79.9%	73.9%
3496242	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.56	21.0	3.47e-01	84.0%	98.0%
3493866	216.1.1.26 ↗	a+b two layers › UBC-like › UBC-like › UBC-like › FmiP_Thoc5	0.56	26.0	2.98e-01	92.4%	57.1%
2490256	271.1.1.1 ↗	beta barrels › GFP-like › GFP-like › GFP-like › GFP	0.56	17.0	2.47e-01	77.8%	53.0%
4253165	101.1.8.1 ↗	alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase	0.54	31.0	3.14e-01	81.2%	56.4%
5047301	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	31.0	3.83e-01	76.4%	96.7%
3517695	5.1.4.32 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N	0.51	43.0	3.10e-01	93.8%	97.4%