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NC_028805.1__YP_009199212.1__AVV11_gp040__00151

Bact-Vir

NC_028805.1__YP_009199212.1__AVV11_gp040__00151

Identity

Accession:
NC_028805 ↗
Kingdom:
phage

Quality

78.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jenstvirus› Brevibacillus_phage_Jenst

TaxID: 1691954

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-52
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 48.0 4.33e-01 70.8% 68.7%
4eqsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 47.0 3.36e-01 81.2% 23.8%
5nmxB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 46.0 3.68e-01 77.1% 35.5%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.68 55.0 5.43e-01 89.6% 86.3%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.67 55.0 5.42e-01 89.6% 86.3%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 56.0 4.48e-01 97.9% 69.7%
3aljA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 45.0 2.93e-01 79.2% 15.7%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.66 53.0 5.20e-01 89.6% 83.0%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.66 53.0 5.21e-01 89.6% 86.3%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 47.0 4.09e-01 77.1% 64.4%
3ef6A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 46.0 3.45e-01 81.2% 30.8%
6fyqA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 48.0 3.23e-01 83.3% 59.1%
3nx3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 47.0 3.37e-01 83.3% 65.2%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 50.0 4.70e-01 97.9% 85.9%
1ysqA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 44.0 3.07e-01 77.1% 68.5%
1vefA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 47.0 3.32e-01 83.3% 62.1%
3i5tB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 47.0 3.22e-01 83.3% 59.1%
1szsA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 46.0 3.17e-01 83.3% 61.2%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.60 43.0 3.56e-01 79.2% 70.5%
2cy8A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 48.0 3.24e-01 89.6% 75.4%
2epjA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 49.0 3.36e-01 91.7% 63.1%
3l44A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 49.0 3.32e-01 91.7% 62.3%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.60 43.0 3.28e-01 81.2% 43.9%
2ykyB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 49.0 3.29e-01 91.7% 75.7%
4nogA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 46.0 3.13e-01 83.3% 55.0%
6g4bA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 45.0 3.11e-01 83.3% 60.2%
3fvqA02 2.40.50.450 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 44.0 4.52e-01 91.7% 95.5%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.57 41.0 2.44e-01 79.2% 8.6%
4tquS02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 43.0 4.07e-01 91.7% 71.9%
6torA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 41.0 2.93e-01 79.2% 67.4%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 3.54e-01 79.2% 65.4%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 3.96e-01 81.2% 88.9%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 3.81e-01 83.3% 85.7%
7bsbI01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.52 36.0 2.75e-01 75.0% 78.7%
2vh2A02 3.40.50.11690 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cell division protein FtsQ/DivIB 0.52 41.0 3.07e-01 91.7% 37.4%
1i5pA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.51 41.0 2.81e-01 91.7% 75.3%
1fc4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 39.0 2.84e-01 83.3% 60.3%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3770704 2.1.1.49 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MRP-S35 0.77 57.0 5.31e-01 79.2% 66.7%
3302832 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.72 47.0 3.19e-01 79.2% 18.8%
4999831 258.1.1.0 ↗ a+b complex topology › Methionine synthase activation domain-like › Methionine synthase activation domain-like › Methionine synthase activation domain-like 0.69 59.0 3.94e-01 97.9% 62.6%
4999828 258.1.1.1 ↗ a+b complex topology › Methionine synthase activation domain-like › Methionine synthase activation domain-like › Methionine synthase activation domain-like › Met_synt_B12 0.69 59.0 3.88e-01 97.9% 58.1%
4030929 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.69 47.0 3.31e-01 81.2% 23.4%
4031097 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.69 57.0 4.65e-01 95.8% 55.8%
3967108 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.68 51.0 5.47e-01 81.2% 100.0%
3690077 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.68 48.0 2.96e-01 72.9% 29.1%
4999072 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 46.0 3.34e-01 79.2% 25.4%
3641913 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.68 57.0 4.92e-01 93.8% 61.3%
4798110 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.67 48.0 3.46e-01 79.2% 26.1%
5028053 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 55.0 5.34e-01 93.8% 81.8%
3414245 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 58.0 4.91e-01 100.0% 66.3%
4933087 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.66 44.0 3.18e-01 79.2% 23.4%
None — 0.66 46.0 2.73e-01 72.9% 38.6%
4378659 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.66 54.0 5.58e-01 93.8% 100.0%
3375066 2003.1.2.128 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FMO-like, Pyr_redox_3 0.66 48.0 3.20e-01 77.1% 64.4%
3316380 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.65 45.0 3.33e-01 72.9% 42.4%
3283520 2003.1.2.38 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lycopene_cycl 0.65 44.0 2.64e-01 79.2% 9.7%
3599142 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 57.0 5.26e-01 95.8% 80.0%
3860101 2.1.1.237 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30958 0.64 55.0 4.88e-01 97.9% 71.4%
3960690 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.64 44.0 3.16e-01 79.2% 22.8%
3771117 2.1.1.237 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30958 0.64 54.0 4.88e-01 100.0% 82.9%
5047864 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.63 54.0 4.12e-01 100.0% 88.3%
4156740 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 48.0 4.83e-01 85.4% 82.0%
3582840 2.1.1.37 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.63 47.0 3.49e-01 81.2% 41.6%
3164387 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.62 49.0 4.99e-01 100.0% 100.0%
2469782 7577.1.1.2 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.62 45.0 2.74e-01 72.9% 83.6%
3242784 2.1.1.218 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_6th 0.62 49.0 4.43e-01 91.7% 64.3%
3211786 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 4.22e-01 93.8% 89.4%
4194365 7577.1.1.0 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases 0.62 48.0 2.67e-01 85.4% 48.9%
4125583 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 50.0 4.73e-01 95.8% 80.0%
3999307 2.1.1.146 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1-like 0.60 51.0 4.59e-01 100.0% 84.3%
3739740 2003.1.2.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.60 41.0 2.43e-01 72.9% 7.9%
3604522 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 42.0 2.81e-01 75.0% 89.3%
3491522 2.1.1.37 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.60 44.0 3.72e-01 81.2% 60.0%
4266069 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.60 42.0 3.36e-01 77.1% 100.0%
4371403 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.58 46.0 3.71e-01 95.8% 89.1%
3964300 2.1.1.37 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.58 42.0 3.40e-01 83.3% 42.7%
11196 2484.1.1.56 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR 0.57 40.0 2.72e-01 75.0% 18.7%
3893554 1021.1.1.1 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › OB_NTP_bind 0.57 42.0 2.94e-01 83.3% 27.6%
4172286 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 45.0 3.72e-01 95.8% 47.0%
4944505 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.56 46.0 3.58e-01 97.9% 87.5%
1567589 2.4.1.7 ↗ beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.55 44.0 4.27e-01 97.9% 93.0%
3958929 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 40.0 2.93e-01 81.2% 30.3%
5002913 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.54 42.0 3.04e-01 93.8% 28.2%
3599291 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 39.0 2.52e-01 93.8% 32.8%
None — 0.50 36.0 2.31e-01 83.3% 87.7%