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NC_028834.1__YP_009201750.1__AVV27_gp16__00016
Bact-VirNC_028834.1__YP_009201750.1__AVV27_gp16__00016
Identity
- Accession:
- NC_028834 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
TaxID: 1589747
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-141
Domain cluster:
rep: KX268652.1__ANT40731.1__TRS1_19__00018__D16-136
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 31.0 | 4.22e-01 | 77.0% | 100.0% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.61 | 31.0 | 3.52e-01 | 89.3% | 63.0% |
| 1v63A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.58 | 33.0 | 3.58e-01 | 100.0% | 66.3% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.53 | 29.0 | 3.44e-01 | 94.3% | 78.8% |
| 7bqiA01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.51 | 40.0 | 3.76e-01 | 83.6% | 90.1% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 34.0 | 3.88e-01 | 95.9% | 93.3% |
| 5dmxB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 29.0 | 2.71e-01 | 82.0% | 44.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3864857 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 33.0 | 3.23e-01 | 80.3% | 45.0% |
| 4954909 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 26.0 | 3.08e-01 | 86.9% | 57.6% |
| 5011451 | 304.123.1.0 ↗ | a+b two layers › Alpha-beta plaits › PF0523-like › PF0523-like | 0.58 | 32.0 | 3.23e-01 | 82.0% | 52.5% |
| 3238610 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.58 | 34.0 | 3.21e-01 | 82.8% | 46.9% |
| 3478383 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.57 | 32.0 | 3.08e-01 | 82.8% | 44.8% |
| 3985490 | 192.2.1.5 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 | 0.53 | 33.0 | 3.34e-01 | 99.2% | 59.7% |
| 3595452 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 41.0 | 3.79e-01 | 82.0% | 90.3% |
| 5058243 | 3685.1.1.0 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain | 0.52 | 29.0 | 3.41e-01 | 91.0% | 81.2% |