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NC_028834.1__YP_009201771.1__AVV27_gp37__00037
Bact-VirNC_028834.1__YP_009201771.1__AVV27_gp37__00037
Identity
- Accession:
- NC_028834 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 1589747
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-90
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.68 | 47.0 | 4.93e-01 | 70.6% | 92.1% |
| 2yfkA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.64 | 44.0 | 3.34e-01 | 70.6% | 68.9% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 46.0 | 3.90e-01 | 87.1% | 65.8% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.57 | 45.0 | 3.86e-01 | 88.2% | 86.3% |
| 6xy4A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.57 | 41.0 | 3.60e-01 | 75.3% | 86.2% |
| 7zb5E01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.56 | 41.0 | 2.91e-01 | 81.2% | 52.0% |
| 1y8aA02 | 1.10.3870.10 | Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily | 0.52 | 40.0 | 3.63e-01 | 83.5% | 87.9% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 41.0 | 3.54e-01 | 85.9% | 74.4% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.51 | 35.0 | 3.71e-01 | 76.5% | 82.9% |
| 3qxlA00 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.51 | 45.0 | 3.27e-01 | 100.0% | 94.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942424 | 632.11.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 | 0.71 | 49.0 | 5.23e-01 | 71.8% | 100.0% |
| 3375617 | 192.5.1.30 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF641 | 0.68 | 33.0 | 3.38e-01 | 91.8% | 47.5% |
| 4025637 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 46.0 | 3.81e-01 | 72.9% | 90.7% |
| 1275997 | 2003.1.14.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace | 0.64 | 44.0 | 3.22e-01 | 70.6% | 60.5% |
| 3782949 | 109.4.1.168 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CTK3 | 0.62 | 44.0 | 3.36e-01 | 75.3% | 65.7% |
| 4952220 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.58 | 43.0 | 3.97e-01 | 78.8% | 64.2% |
| 3632454 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.56 | 39.0 | 3.91e-01 | 70.6% | 83.5% |
D2
high
residues 94-175
Domain cluster:
rep: KY883656.1__ASV43715.1__X__00045__D52-124