NC_028847.1__YP_009202791.1__AVT32_gp060__00060

Bact-Vir

Identity

83.5 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Dhakavirus› Escherichia_phage_QL01

TaxID: 1673871

View cluster (3 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-109

PDB

Domain cluster: rep: BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00169__D1-120

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ln0A00	3.40.1440.10	Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease	0.68	54.0	5.75e-01	92.5%	98.9%
7wntA02	3.10.20.580	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.53	31.0	3.49e-01	72.0%	76.9%
2hfqA00	3.10.510.10	Alpha Beta › Roll › NE1680-like fold › NE1680-like	0.53	39.0	4.25e-01	81.3%	98.8%
3n6xA03	3.30.1490.270	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 ›	0.50	25.0	3.30e-01	71.0%	89.3%
1iqzA00	3.30.70.20	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.50	29.0	3.25e-01	99.1%	74.1%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5070656	821.1.1.15 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508	0.69	44.0	4.88e-01	84.1%	80.0%
77927	821.1.1.1 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG	0.69	55.0	5.88e-01	86.9%	97.9%
4054044	821.1.1.9 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054	0.65	51.0	5.25e-01	93.5%	87.0%
3215217	821.1.1.7 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG	0.64	53.0	4.61e-01	89.7%	67.9%
4796557	4012.3.1.0 ↗	a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9	0.53	32.0	3.76e-01	74.8%	98.4%
4028366	212.1.1.0 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like	0.52	30.0	3.43e-01	73.8%	79.7%
5076740	304.4.1.0 ↗	a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel	0.51	34.0	3.47e-01	95.3%	69.5%

D2 medium residues 160-204

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4276290	206.1.3.19 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C	0.53	39.0	2.53e-01	93.3%	15.2%