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NC_028857.1__YP_009203845.1__CPT_Merlin131__00131
Bact-VirNC_028857.1__YP_009203845.1__CPT_Merlin131__00131
Identity
- Accession:
- NC_028857 ↗
- Kingdom:
- phage
Quality
82.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Moonvirus›
Citrobacter_phage_Merlin
TaxID: 1675602
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-81
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26834.1 best | Phage_T4_Y06J | 89.9 | 1.50e-25 | 96.3% | 56.5% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 42.0 | 5.18e-01 | 71.6% | 94.0% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 47.0 | 5.42e-01 | 95.1% | 94.7% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 44.0 | 4.66e-01 | 90.1% | 71.8% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 5.04e-01 | 96.3% | 96.1% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 44.0 | 4.97e-01 | 74.1% | 85.5% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 41.0 | 4.65e-01 | 71.6% | 83.1% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 41.0 | 4.60e-01 | 71.6% | 81.0% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 41.0 | 4.58e-01 | 71.6% | 83.3% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.50e-01 | 92.6% | 83.1% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.51e-01 | 92.6% | 83.3% |
| 5uctB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 42.0 | 3.93e-01 | 74.1% | 78.0% |
| 2vc8A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 41.0 | 4.26e-01 | 72.8% | 83.3% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 39.0 | 4.36e-01 | 74.1% | 100.0% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.54 | 37.0 | 3.60e-01 | 71.6% | 90.1% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.52 | 39.0 | 3.94e-01 | 97.5% | 78.3% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 4.15e-01 | 88.9% | 100.0% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 43.0 | 4.29e-01 | 92.6% | 90.6% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 4.22e-01 | 92.6% | 94.1% |
| 1jkgB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 2.82e-01 | 72.8% | 84.4% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740753 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.73 | 42.0 | 4.69e-01 | 71.6% | 72.3% |
| 4004283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 50.0 | 5.39e-01 | 74.1% | 82.9% |
| 3651961 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.72 | 44.0 | 5.14e-01 | 74.1% | 89.1% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 44.0 | 5.03e-01 | 75.3% | 83.3% |
| 4210436 | 7090.1.1.1 ↗ | extended segments › Glycyl radical domain › Glycyl radical domain › Glycyl radical domain › Gly_radical | 0.72 | 50.0 | 4.26e-01 | 74.1% | 46.4% |
| 3486328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 43.0 | 4.85e-01 | 72.8% | 80.0% |
| 3660923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 44.0 | 4.71e-01 | 75.3% | 71.4% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 43.0 | 3.47e-01 | 93.8% | 31.6% |
| 3222146 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 45.0 | 4.97e-01 | 76.5% | 81.5% |
| 3300226 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.70 | 49.0 | 4.98e-01 | 72.8% | 93.8% |
| 3924379 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 42.0 | 4.70e-01 | 72.8% | 77.8% |
| 3264809 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.70 | 42.0 | 4.94e-01 | 72.8% | 89.1% |
| 3816455 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.70 | 49.0 | 4.17e-01 | 72.8% | 60.0% |
| 4660107 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.70 | 47.0 | 5.30e-01 | 100.0% | 95.0% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.70 | 45.0 | 4.78e-01 | 93.8% | 75.7% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.69 | 47.0 | 5.03e-01 | 100.0% | 81.4% |
| 5000308 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.69 | 42.0 | 5.06e-01 | 72.8% | 100.0% |
| 5057234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 41.0 | 4.37e-01 | 74.1% | 68.6% |
| 4956443 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 44.0 | 4.99e-01 | 72.8% | 88.3% |
| 4101502 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 41.0 | 4.82e-01 | 71.6% | 90.7% |
| 3415020 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 44.0 | 4.43e-01 | 76.5% | 66.3% |
| 3885049 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 42.0 | 4.85e-01 | 71.6% | 90.9% |
| 4112177 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 43.0 | 4.71e-01 | 72.8% | 80.0% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.68 | 48.0 | 4.61e-01 | 72.8% | 73.3% |
| 3756428 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 44.0 | 4.09e-01 | 76.5% | 53.0% |
| 5042892 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 43.0 | 4.89e-01 | 74.1% | 88.3% |
| 3274582 | 4.1.1.365 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C | 0.67 | 41.0 | 4.82e-01 | 95.1% | 90.9% |
| 4372288 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.67 | 46.0 | 5.18e-01 | 100.0% | 95.0% |
| 3669214 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.67 | 46.0 | 3.95e-01 | 71.6% | 57.7% |
| 3684908 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.67 | 47.0 | 4.87e-01 | 100.0% | 78.7% |
| 4995677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 42.0 | 4.88e-01 | 74.1% | 92.7% |
| 3256432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 44.0 | 5.00e-01 | 75.3% | 91.7% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.67 | 43.0 | 4.84e-01 | 74.1% | 88.3% |
| 3821919 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.67 | 41.0 | 4.57e-01 | 97.5% | 81.7% |
| 4059465 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.66 | 42.0 | 4.53e-01 | 72.8% | 76.5% |
| 3328489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 43.0 | 4.60e-01 | 98.8% | 77.1% |
| 3619215 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 44.0 | 4.10e-01 | 77.8% | 55.0% |
| 3555930 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.66 | 44.0 | 4.69e-01 | 77.8% | 80.0% |
| 3486329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 41.0 | 4.53e-01 | 93.8% | 80.0% |
| 5051313 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.79e-01 | 74.1% | 86.2% |
| 5036498 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 43.0 | 4.43e-01 | 76.5% | 72.0% |
| 4984882 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 45.0 | 4.75e-01 | 77.8% | 82.9% |
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 44.0 | 4.84e-01 | 93.8% | 92.3% |
| 3296865 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.62 | 43.0 | 4.04e-01 | 84.0% | 57.1% |
| 3514522 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.61 | 44.0 | 4.59e-01 | 75.3% | 93.3% |
| None | — | 0.61 | 52.0 | 3.28e-01 | 92.6% | 23.5% | |
| 4942172 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 40.0 | 3.93e-01 | 74.1% | 61.1% |
| 2855767 | 4.1.1.4 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e | 0.60 | 42.0 | 3.66e-01 | 74.1% | 54.3% |
| 4121981 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.60 | 54.0 | 4.64e-01 | 98.8% | 76.8% |
| 3500084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 4.48e-01 | 72.8% | 95.7% |
| 3302816 | 4.1.1.235 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 | 0.59 | 43.0 | 3.72e-01 | 77.8% | 90.0% |
| 3951374 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.59 | 41.0 | 3.82e-01 | 74.1% | 76.2% |
| 1421013 | 4.1.1.22 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e | 0.58 | 42.0 | 3.52e-01 | 76.5% | 87.9% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 52.0 | 4.40e-01 | 98.8% | 77.7% |
| 3302391 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.57 | 48.0 | 4.03e-01 | 92.6% | 56.4% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.56 | 50.0 | 4.32e-01 | 98.8% | 75.2% |
| 3358753 | 4.1.1.381 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 | 0.56 | 43.0 | 3.42e-01 | 84.0% | 40.6% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.55 | 46.0 | 4.40e-01 | 95.1% | 76.8% |
| 4002679 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.55 | 49.0 | 4.29e-01 | 98.8% | 94.2% |
| 3520059 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 37.0 | 3.27e-01 | 70.4% | 95.8% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.54 | 47.0 | 4.24e-01 | 97.5% | 92.2% |
| 4029199 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 2.50e-01 | 91.4% | 18.1% |
| 3593811 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 36.0 | 3.19e-01 | 72.8% | 94.4% |
| 4261791 | 4.1.1.24 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e | 0.52 | 44.0 | 3.68e-01 | 95.1% | 56.6% |
| 4203006 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.51 | 44.0 | 3.96e-01 | 100.0% | 69.1% |
| 3707479 | 4.1.1.5 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e | 0.51 | 43.0 | 3.30e-01 | 95.1% | 41.9% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.51 | 43.0 | 4.00e-01 | 97.5% | 89.0% |
| 2721517 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.93e-01 | 92.6% | 88.8% |
| 3209258 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 34.0 | 2.33e-01 | 71.6% | 86.2% |