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NC_028871.1__YP_009204872.1__AVV22_gp29__00029
Bact-VirNC_028871.1__YP_009204872.1__AVV22_gp29__00029
Identity
- Accession:
- NC_028871 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-86
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 63.0 | 6.49e-01 | 74.0% | 89.0% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.83 | 63.0 | 6.28e-01 | 80.5% | 100.0% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 62.0 | 6.88e-01 | 80.5% | 98.4% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 58.0 | 6.23e-01 | 77.9% | 86.2% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.80 | 59.0 | 5.18e-01 | 76.6% | 87.2% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 61.0 | 5.48e-01 | 80.5% | 67.6% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.79 | 58.0 | 6.35e-01 | 76.6% | 96.9% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 59.0 | 4.34e-01 | 79.2% | 35.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.76 | 56.0 | 4.79e-01 | 76.6% | 86.3% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 60.0 | 6.04e-01 | 84.4% | 90.9% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 59.0 | 5.84e-01 | 84.4% | 80.2% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.74 | 52.0 | 5.59e-01 | 76.6% | 85.1% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.74 | 57.0 | 4.88e-01 | 83.1% | 52.5% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.74 | 52.0 | 5.82e-01 | 77.9% | 98.3% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 57.0 | 5.16e-01 | 80.5% | 66.7% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 59.0 | 5.61e-01 | 87.0% | 78.0% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.71 | 55.0 | 5.22e-01 | 81.8% | 74.4% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 52.0 | 5.24e-01 | 79.2% | 80.3% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.68 | 50.0 | 4.91e-01 | 79.2% | 71.8% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 54.0 | 4.68e-01 | 88.3% | 58.3% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.66 | 55.0 | 5.17e-01 | 93.5% | 79.6% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 44.0 | 3.96e-01 | 77.9% | 54.3% |
| 2qfcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 45.0 | 3.11e-01 | 83.1% | 32.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785916 | 3559.1.1.40 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31 | 0.92 | 71.0 | 6.19e-01 | 84.4% | 56.4% |
| 4674 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.81 | 63.0 | 6.77e-01 | 81.8% | 95.4% |
| 5001019 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.81 | 65.0 | 4.90e-01 | 84.4% | 39.4% |
| 5046748 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.79 | 57.0 | 6.02e-01 | 81.8% | 84.3% |
| 5078048 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.78 | 60.0 | 6.08e-01 | 83.1% | 84.0% |
| 3449084 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.78 | 60.0 | 5.38e-01 | 84.4% | 60.0% |
| 4273807 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.78 | 62.0 | 3.77e-01 | 84.4% | 40.9% |
| 4177393 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 61.0 | 4.88e-01 | 84.4% | 49.0% |
| 4329615 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.76 | 61.0 | 6.40e-01 | 84.4% | 92.9% |
| 3221478 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.76 | 55.0 | 4.99e-01 | 75.3% | 66.0% |
| 3678035 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.72 | 52.0 | 5.42e-01 | 79.2% | 84.3% |
| 2555592 | 5069.1.1.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I | 0.70 | 53.0 | 5.13e-01 | 80.5% | 100.0% |
| 3492576 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.69 | 58.0 | 4.25e-01 | 90.9% | 39.5% |
| 3189791 | 601.19.1.18 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Mmc1_C | 0.67 | 50.0 | 3.54e-01 | 79.2% | 39.6% |
D2
high
residues 128-230
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g1iA02 | 3.30.300.170 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.73 | 49.0 | 5.75e-01 | 82.5% | 100.0% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 41.0 | 4.82e-01 | 87.4% | 84.1% |
| 6nqbC01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.70 | 50.0 | 5.28e-01 | 83.5% | 84.6% |
| 3gkuC02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.68 | 53.0 | 5.65e-01 | 100.0% | 96.6% |
| 7nasX01 | 3.30.300.70 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal | 0.67 | 49.0 | 5.37e-01 | 83.5% | 100.0% |
| 3h2tA01 | 3.30.300.200 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.65 | 44.0 | 5.06e-01 | 79.6% | 100.0% |
| 2pt7G01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.65 | 47.0 | 5.21e-01 | 85.4% | 100.0% |
| 4tpsD00 | 3.30.300.180 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DnaA, N-terminal domain | 0.64 | 47.0 | 5.11e-01 | 80.6% | 92.9% |
| 4ip2A02 | 3.40.1670.10 | Alpha Beta › 3-Layer(aba) Sandwich › UbiD C-terminal domain-like › UbiD C-terminal domain-like | 0.64 | 55.0 | 5.11e-01 | 94.2% | 97.7% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 52.0 | 5.19e-01 | 90.3% | 99.1% |
| 2e7gA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 49.0 | 4.86e-01 | 82.5% | 88.7% |
| 2jmpA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.62 | 45.0 | 4.87e-01 | 86.4% | 92.0% |
| 3cniA00 | 3.40.1710.10 | Alpha Beta › 3-Layer(aba) Sandwich › abc type-2 transporter like fold › abc type-2 transporter like domain | 0.61 | 54.0 | 4.88e-01 | 100.0% | 86.9% |
| 2ymaA00 | 3.10.310.60 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.61 | 52.0 | 4.79e-01 | 94.2% | 75.6% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.61 | 47.0 | 4.32e-01 | 82.5% | 73.1% |
| 1ml8A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.60 | 47.0 | 4.79e-01 | 83.5% | 97.9% |
| 2mcqA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.60 | 41.0 | 4.61e-01 | 79.6% | 97.3% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.60 | 46.0 | 3.96e-01 | 82.5% | 75.0% |
| 3npdA00 | 3.30.300.250 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.60 | 51.0 | 4.97e-01 | 97.1% | 86.7% |
| 1vhsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 48.0 | 4.13e-01 | 93.2% | 54.5% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 49.0 | 4.58e-01 | 93.2% | 98.5% |
| 3cskA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 38.0 | 4.32e-01 | 80.6% | 92.1% |
| 7r3bE01 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.57 | 43.0 | 4.67e-01 | 80.6% | 100.0% |
| 5cg8A00 | 3.60.130.30 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › | 0.57 | 49.0 | 3.64e-01 | 94.2% | 91.7% |
| 4n06A01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.57 | 35.0 | 3.83e-01 | 90.3% | 75.6% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.57 | 51.0 | 3.18e-01 | 100.0% | 88.9% |
| 1th0B00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.56 | 44.0 | 3.44e-01 | 83.5% | 47.1% |
| 3w6sC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 48.0 | 3.82e-01 | 96.1% | 96.0% |
| 3fvyA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 37.0 | 4.23e-01 | 80.6% | 93.3% |
| 1wz8A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.56 | 47.0 | 3.77e-01 | 91.3% | 58.7% |
| 3n05A01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.56 | 43.0 | 3.16e-01 | 83.5% | 36.3% |
| 2vzyC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 48.0 | 3.97e-01 | 95.1% | 88.9% |
| 3ewgA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.56 | 36.0 | 3.90e-01 | 85.4% | 81.2% |
| 1jr7A00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.56 | 47.0 | 3.38e-01 | 92.2% | 96.7% |
| 3m6nA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.56 | 43.0 | 3.49e-01 | 84.5% | 59.0% |
| 4ls9B02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 44.0 | 4.24e-01 | 87.4% | 79.7% |
| 4ltyA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 40.0 | 2.97e-01 | 75.7% | 46.3% |
| 3k93A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 48.0 | 3.73e-01 | 95.1% | 83.9% |
| 3proC02 | 3.30.300.50 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.55 | 36.0 | 4.10e-01 | 87.4% | 98.6% |
| 2inbA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 47.0 | 4.34e-01 | 98.1% | 75.0% |
| 3vseA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.53 | 34.0 | 3.99e-01 | 74.8% | 95.7% |
| 2otnB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 45.0 | 4.02e-01 | 93.2% | 83.6% |
| 5fclE01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.53 | 34.0 | 3.59e-01 | 89.3% | 72.2% |
| 5fusA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 45.0 | 3.65e-01 | 98.1% | 60.1% |
| 3va7A05 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 34.0 | 3.47e-01 | 84.5% | 66.0% |
| 2yzsA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.53 | 32.0 | 3.59e-01 | 95.1% | 78.8% |
| 5u3fA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.52 | 35.0 | 2.96e-01 | 70.9% | 44.4% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 44.0 | 4.09e-01 | 98.1% | 75.4% |
| 3hkxA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.51 | 40.0 | 3.00e-01 | 83.5% | 37.3% |
| 2yziB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 32.0 | 3.00e-01 | 73.8% | 48.9% |
| 3fbxA00 | 3.60.60.30 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › | 0.51 | 43.0 | 2.84e-01 | 98.1% | 55.2% |
| 2ppyA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 44.0 | 3.55e-01 | 97.1% | 57.8% |
| 4bxiA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 40.0 | 3.67e-01 | 89.3% | 64.4% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.50 | 43.0 | 3.68e-01 | 97.1% | 97.1% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 3.12e-01 | 88.3% | 86.6% |
| 3qqmA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.50 | 35.0 | 3.21e-01 | 70.9% | 57.9% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047209 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.74 | 51.0 | 5.85e-01 | 81.6% | 97.3% |
| 3786473 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.73 | 57.0 | 5.91e-01 | 82.5% | 96.8% |
| 363469 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.73 | 49.0 | 5.72e-01 | 82.5% | 100.0% |
| 4932807 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.72 | 58.0 | 5.05e-01 | 86.4% | 62.6% |
| 4458088 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.72 | 52.0 | 5.75e-01 | 83.5% | 96.2% |
| 4040549 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.72 | 51.0 | 4.12e-01 | 73.8% | 88.4% |
| 3984451 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.71 | 49.0 | 5.55e-01 | 83.5% | 97.3% |
| 3656886 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.70 | 60.0 | 3.80e-01 | 94.2% | 24.9% |
| 5078047 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.69 | 42.0 | 5.06e-01 | 72.8% | 95.4% |
| 3833447 | 2003.1.5.174 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 | 0.69 | 59.0 | 3.80e-01 | 95.1% | 28.9% |
| 2698882 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.68 | 51.0 | 4.64e-01 | 86.4% | 58.2% |
| 3603198 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.68 | 48.0 | 3.99e-01 | 72.8% | 88.0% |
| 4293559 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.68 | 47.0 | 3.94e-01 | 71.8% | 86.9% |
| 4308223 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.68 | 50.0 | 5.04e-01 | 83.5% | 76.2% |
| 1019401 | 327.11.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KhpA-B_KH | 0.68 | 53.0 | 5.65e-01 | 100.0% | 96.6% |
| 3613673 | 327.13.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system | 0.68 | 49.0 | 4.13e-01 | 85.4% | 44.8% |
| 4937796 | 327.11.1.16 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_1 | 0.68 | 42.0 | 5.08e-01 | 81.6% | 100.0% |
| 4165275 | 327.6.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Germane | 0.67 | 60.0 | 5.29e-01 | 98.1% | 72.0% |
| 4928454 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.67 | 58.0 | 5.89e-01 | 97.1% | 96.0% |
| 3371640 | 2003.1.5.156 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 | 0.67 | 60.0 | 3.86e-01 | 100.0% | 28.9% |
| 5070009 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.67 | 42.0 | 4.98e-01 | 81.6% | 100.0% |
| 5054501 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.67 | 54.0 | 4.63e-01 | 86.4% | 56.9% |
| 5058450 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.66 | 52.0 | 4.93e-01 | 84.5% | 71.2% |
| 4951526 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.66 | 44.0 | 4.91e-01 | 83.5% | 92.0% |
| 3598535 | 324.1.1.0 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like | 0.66 | 50.0 | 5.32e-01 | 80.6% | 93.3% |
| 3674608 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.66 | 50.0 | 5.41e-01 | 80.6% | 97.6% |
| 3596845 | 327.2.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like | 0.66 | 46.0 | 5.13e-01 | 82.5% | 94.9% |
| 3446415 | 327.2.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA | 0.66 | 48.0 | 4.98e-01 | 81.6% | 83.2% |
| 4437921 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.65 | 50.0 | 5.17e-01 | 85.4% | 88.4% |
| 4422829 | 327.5.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › PF27533 | 0.65 | 48.0 | 4.95e-01 | 84.5% | 84.2% |
| 3709022 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.65 | 51.0 | 5.39e-01 | 84.5% | 97.8% |
| 3678661 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.63 | 49.0 | 3.10e-01 | 82.5% | 23.3% |
| 4024739 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.63 | 49.0 | 4.56e-01 | 83.5% | 73.1% |
| 3655517 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 48.0 | 3.73e-01 | 82.5% | 54.5% |
| 3642618 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 48.0 | 3.55e-01 | 82.5% | 46.5% |
| 4594683 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.62 | 47.0 | 4.91e-01 | 82.5% | 96.8% |
| 3421699 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 48.0 | 3.57e-01 | 83.5% | 55.6% |
| 3698900 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.61 | 48.0 | 3.49e-01 | 84.5% | 50.5% |
| 3644493 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 48.0 | 3.25e-01 | 84.5% | 62.4% |
| 4938489 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.61 | 48.0 | 5.05e-01 | 84.5% | 95.6% |
| 3458803 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 47.0 | 3.76e-01 | 82.5% | 58.6% |
| 4029898 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.61 | 50.0 | 4.49e-01 | 89.3% | 77.2% |
| 4331252 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.61 | 47.0 | 4.84e-01 | 85.4% | 92.0% |
| 4317511 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.61 | 46.0 | 4.59e-01 | 82.5% | 84.5% |
| 5016933 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.60 | 46.0 | 3.80e-01 | 83.5% | 97.4% |
| 1106826 | 327.2.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA | 0.60 | 41.0 | 4.60e-01 | 82.5% | 96.1% |
| 4346470 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.60 | 52.0 | 3.78e-01 | 95.1% | 36.1% |
| 4607024 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.60 | 46.0 | 3.86e-01 | 82.5% | 73.9% |
| 3835553 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.59 | 46.0 | 3.84e-01 | 83.5% | 74.6% |
| 4025416 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.59 | 50.0 | 3.46e-01 | 92.2% | 52.4% |
| 3923276 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.59 | 48.0 | 3.51e-01 | 87.4% | 56.8% |
| 4933915 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.59 | 50.0 | 4.38e-01 | 94.2% | 73.1% |
| 4306163 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.59 | 47.0 | 4.54e-01 | 84.5% | 76.5% |
| 4134967 | 327.12.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › UbiD C-terminal domain-like › UbiD C-terminal domain-like › UbiD_C | 0.59 | 53.0 | 3.93e-01 | 100.0% | 47.5% |
| 3654691 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.59 | 49.0 | 3.50e-01 | 92.2% | 48.3% |
| 5053352 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 50.0 | 4.35e-01 | 93.2% | 85.6% |
| 5065820 | 244.4.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 | 0.59 | 42.0 | 3.46e-01 | 97.1% | 41.1% |
| 3506091 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.59 | 45.0 | 3.75e-01 | 82.5% | 71.9% |
| 1179312 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.58 | 44.0 | 3.49e-01 | 79.6% | 53.3% |
| 3839738 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.58 | 45.0 | 4.72e-01 | 83.5% | 96.7% |
| 3903935 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.58 | 51.0 | 3.63e-01 | 99.0% | 43.8% |
| 3009967 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.57 | 49.0 | 3.47e-01 | 97.1% | 70.1% |
| 3593536 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 51.0 | 4.27e-01 | 100.0% | 87.4% |
| 4141948 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.57 | 49.0 | 4.01e-01 | 94.2% | 97.3% |
| 3222276 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.56 | 43.0 | 3.71e-01 | 82.5% | 77.6% |
| 4023992 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.56 | 49.0 | 3.32e-01 | 98.1% | 50.5% |
| 3234550 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.56 | 47.0 | 3.45e-01 | 92.2% | 57.1% |
| 3713189 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.55 | 49.0 | 3.42e-01 | 97.1% | 40.6% |
| 4974216 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 48.0 | 4.13e-01 | 98.1% | 60.6% |
| 4133737 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.55 | 46.0 | 3.80e-01 | 92.2% | 95.2% |
| 4094864 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.54 | 48.0 | 4.02e-01 | 96.1% | 71.3% |
| 4114973 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.54 | 47.0 | 3.97e-01 | 94.2% | 98.8% |
| 3936276 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.54 | 47.0 | 3.65e-01 | 96.1% | 67.1% |
| 3843599 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.53 | 45.0 | 3.91e-01 | 99.0% | 94.3% |
| 4138566 | 7582.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD | 0.53 | 45.0 | 3.87e-01 | 92.2% | 97.5% |
| 3166390 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 44.0 | 3.93e-01 | 94.2% | 83.2% |
| 5051348 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.53 | 45.0 | 3.22e-01 | 96.1% | 80.4% |
| 3279523 | 7579.1.1.140 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_9, Abhydrolase_9_N | 0.52 | 45.0 | 3.18e-01 | 100.0% | 57.0% |
| 4537299 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.52 | 46.0 | 3.13e-01 | 100.0% | 37.2% |
| 3782404 | 7516.1.1.18 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Anp1 | 0.51 | 39.0 | 2.70e-01 | 80.6% | 79.2% |
| 4240829 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.51 | 38.0 | 3.78e-01 | 76.7% | 99.0% |
| 4986405 | 7582.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD | 0.50 | 44.0 | 3.94e-01 | 94.2% | 100.0% |
| 5073881 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.50 | 42.0 | 2.74e-01 | 93.2% | 34.2% |