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NC_028883.1__YP_009206173.1__PHIMMP01_20054__00055
Bact-VirNC_028883.1__YP_009206173.1__PHIMMP01_20054__00055
Identity
- Accession:
- NC_028883 ↗
- Kingdom:
- phage
Quality
68.2
mean pLDDT
Taxonomy
TaxID: 1582156
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-58
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vkcA01 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.62 | 49.0 | 3.51e-01 | 88.9% | 35.2% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.60 | 46.0 | 4.20e-01 | 85.2% | 93.2% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.60 | 46.0 | 4.59e-01 | 90.7% | 100.0% |
| 1gs0A01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.57 | 45.0 | 3.40e-01 | 85.2% | 38.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4073199 | 101.1.11.190 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2610 | 0.69 | 53.0 | 5.68e-01 | 87.0% | 100.0% |
| 3502686 | 2484.1.1.88 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ParM_N | 0.69 | 47.0 | 3.34e-01 | 88.9% | 23.0% |
| 3539926 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.67 | 47.0 | 3.05e-01 | 72.2% | 28.9% |
| 4645504 | 103.5.1.3 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › IPMS_D2 | 0.66 | 56.0 | 4.73e-01 | 98.1% | 95.8% |
| 3787836 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 56.0 | 3.31e-01 | 98.1% | 24.3% |
| 4942180 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.64 | 46.0 | 3.44e-01 | 75.9% | 65.6% |
| 3494358 | 148.1.3.213 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind | 0.64 | 52.0 | 4.70e-01 | 90.7% | 73.3% |
| 3171546 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 53.0 | 3.16e-01 | 98.1% | 23.3% |
| 3951354 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.63 | 53.0 | 5.07e-01 | 98.1% | 89.2% |
| 4510097 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.57 | 47.0 | 4.33e-01 | 96.3% | 90.7% |