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NC_028887.1__YP_009206384.1__AVV02_gp029__00029

Bact-Vir

NC_028887.1__YP_009206384.1__AVV02_gp029__00029

Identity

Accession:
NC_028887 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5a8iA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.66 51.0 4.12e-01 82.3% 76.7%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.65 52.0 4.35e-01 88.7% 99.1%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.65 50.0 4.83e-01 98.4% 74.0%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.65 50.0 3.55e-01 85.5% 90.0%
1uhtA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.63 48.0 3.89e-01 82.3% 72.9%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.63 46.0 3.10e-01 79.0% 58.0%
6hbzA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.62 50.0 4.20e-01 87.1% 82.5%
2b5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 42.0 3.48e-01 71.0% 83.2%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 53.0 5.03e-01 100.0% 98.7%
1ybiA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 46.0 3.69e-01 87.1% 94.4%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 42.0 3.31e-01 74.2% 91.7%
3h79A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 41.0 3.48e-01 72.6% 91.3%
1nr0A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 45.0 2.91e-01 82.3% 87.2%
1jlxA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 46.0 3.67e-01 88.7% 100.0%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 43.0 3.85e-01 79.0% 75.8%
2ff4A03 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 44.0 3.87e-01 82.3% 83.7%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 41.0 3.22e-01 75.8% 60.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 42.0 3.84e-01 79.0% 83.9%
3akhA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 42.0 3.36e-01 79.0% 100.0%
4cckA03 3.90.930.40 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.58 42.0 3.31e-01 79.0% 72.6%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.09e-01 93.5% 93.2%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 41.0 3.39e-01 80.6% 100.0%
3s2kB01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 48.0 3.14e-01 95.2% 87.3%
5e50A01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.57 44.0 3.86e-01 87.1% 88.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.86e-01 96.8% 63.6%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.06e-01 93.5% 55.0%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 43.0 2.74e-01 85.5% 82.3%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 2.93e-01 93.5% 87.7%
1ujrA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 42.0 3.87e-01 82.3% 62.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 43.0 3.23e-01 87.1% 88.1%
1iz0A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.56 40.0 3.21e-01 79.0% 79.3%
4bt2A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.56 47.0 3.97e-01 100.0% 57.9%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.54 44.0 2.83e-01 91.9% 91.6%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.54 39.0 3.72e-01 82.3% 97.5%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.54 48.0 3.15e-01 100.0% 88.2%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 44.0 3.27e-01 96.8% 94.5%
3rlfF02 3.10.650.10 Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like 0.53 40.0 3.66e-01 82.3% 64.6%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.53 38.0 3.23e-01 80.6% 81.2%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.52 39.0 3.27e-01 88.7% 97.7%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.51 37.0 3.87e-01 75.8% 96.3%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.21e-01 91.9% 94.4%
1ijqA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 41.0 2.84e-01 96.8% 84.3%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980228 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 58.0 4.66e-01 100.0% 49.6%
1842649 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.66 51.0 4.19e-01 82.3% 80.9%
3190113 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 45.0 2.92e-01 72.6% 33.8%
3656729 5.1.2.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 0.66 46.0 3.55e-01 72.6% 69.2%
3953627 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.65 49.0 4.15e-01 82.3% 80.0%
3416957 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.63 47.0 3.90e-01 80.6% 90.0%
3410220 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.61 45.0 2.97e-01 82.3% 98.6%
3866163 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.60 45.0 2.97e-01 80.6% 82.2%
3237575 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.60 51.0 3.38e-01 100.0% 28.2%
3844453 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.60 47.0 3.08e-01 85.5% 82.2%
3959298 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.60 48.0 4.36e-01 90.3% 100.0%
2841490 5.1.5.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR75_1st 0.59 42.0 3.37e-01 75.8% 57.6%
4274162 5.1.3.48 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 0.59 51.0 3.36e-01 98.4% 83.6%
4010681 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.59 48.0 4.31e-01 96.8% 69.5%
5082170 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 40.0 2.70e-01 71.0% 79.6%
3882151 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.58 46.0 3.01e-01 90.3% 84.8%
4937423 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 48.0 4.37e-01 91.9% 80.0%
1291143 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.58 45.0 3.53e-01 88.7% 79.7%
3244166 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 48.0 3.11e-01 88.7% 78.1%
3521604 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.58 45.0 3.20e-01 87.1% 72.3%
3997581 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 47.0 2.97e-01 91.9% 81.7%
3387119 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.58 49.0 4.43e-01 98.4% 68.9%
3487199 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 46.0 3.98e-01 95.2% 91.7%
3586536 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.57 44.0 3.18e-01 87.1% 99.0%
3524963 219.1.1.122 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28648 0.57 48.0 3.16e-01 100.0% 23.5%
3472948 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.57 46.0 3.71e-01 95.2% 93.2%
3894967 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.56 42.0 3.03e-01 80.6% 71.4%
3596151 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.56 41.0 3.54e-01 80.6% 82.9%
4114928 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.56 44.0 3.28e-01 91.9% 69.2%
3916215 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 46.0 2.85e-01 91.9% 58.6%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 47.0 4.47e-01 100.0% 84.0%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 45.0 4.46e-01 100.0% 95.7%
3792452 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 45.0 2.90e-01 95.2% 83.1%
3898172 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 45.0 2.82e-01 93.5% 61.4%
3780929 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.54 46.0 3.03e-01 95.2% 95.5%
3962230 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.54 42.0 3.81e-01 87.1% 81.2%
4193845 5.1.4.279 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26550 0.53 45.0 2.88e-01 98.4% 83.3%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.53 44.0 4.29e-01 100.0% 94.3%
4956695 4.15.1.0 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.52 42.0 3.98e-01 96.8% 96.2%
3336598 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 36.0 2.45e-01 74.2% 20.8%
5077568 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.52 42.0 4.11e-01 93.5% 84.3%
4078090 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.52 45.0 2.82e-01 100.0% 32.5%
5004274 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 37.0 3.62e-01 82.3% 78.7%
3573009 5.1.5.193 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Ldl_recept_b 0.51 45.0 2.88e-01 100.0% 78.4%
3400422 6.1.1.4 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin 0.51 39.0 3.15e-01 85.5% 87.7%
3991186 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.50 38.0 3.20e-01 83.9% 63.5%
3878795 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.50 40.0 2.52e-01 90.3% 49.9%
D2 high residues 73-135
PDB
Domain cluster: representative
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.82 59.0 6.02e-01 74.6% 85.0%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 56.0 6.20e-01 73.0% 91.8%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 56.0 5.79e-01 73.0% 81.4%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 55.0 6.09e-01 73.0% 92.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.77 55.0 4.63e-01 76.2% 46.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 56.0 5.64e-01 76.2% 83.9%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.76 59.0 5.78e-01 82.5% 83.6%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 54.0 5.83e-01 76.2% 94.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 5.05e-01 74.6% 66.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.74 52.0 5.13e-01 73.0% 77.3%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.24e-01 77.8% 69.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 52.0 5.43e-01 74.6% 100.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 51.0 5.32e-01 74.6% 98.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 52.0 5.39e-01 76.2% 98.3%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 50.0 5.61e-01 73.0% 97.9%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.46e-01 73.0% 96.1%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 50.0 5.14e-01 73.0% 96.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 49.0 5.43e-01 73.0% 93.8%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.72 51.0 4.48e-01 76.2% 62.1%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 5.20e-01 76.2% 95.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 5.17e-01 84.1% 71.2%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 50.0 5.20e-01 74.6% 79.7%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 4.64e-01 76.2% 70.2%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 50.0 4.87e-01 74.6% 82.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 50.0 5.41e-01 74.6% 90.4%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 50.0 5.01e-01 74.6% 92.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 49.0 5.32e-01 73.0% 100.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 53.0 4.88e-01 81.0% 77.8%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 49.0 4.90e-01 74.6% 89.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.14e-01 77.8% 78.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 5.42e-01 74.6% 100.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.49e-01 82.5% 91.2%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 4.68e-01 77.8% 74.0%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.68 52.0 4.28e-01 85.7% 44.5%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 4.71e-01 71.4% 73.0%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 4.37e-01 85.7% 70.1%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 4.63e-01 92.1% 66.4%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 51.0 5.34e-01 85.7% 96.3%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 48.0 4.54e-01 76.2% 84.6%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 4.98e-01 73.0% 100.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 47.0 4.99e-01 74.6% 88.9%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 4.75e-01 95.2% 59.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 4.61e-01 81.0% 79.7%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.66 58.0 4.86e-01 100.0% 93.6%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 45.0 4.68e-01 71.4% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.86e-01 81.0% 78.1%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 51.0 4.82e-01 87.3% 92.2%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.58e-01 74.6% 83.1%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 46.0 3.80e-01 77.8% 40.8%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 45.0 4.34e-01 74.6% 88.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.89e-01 74.6% 90.4%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.48e-01 77.8% 83.3%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.64 48.0 4.99e-01 82.5% 91.2%
2daqA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.42e-01 93.7% 76.4%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 45.0 3.34e-01 76.2% 89.8%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.63 47.0 3.71e-01 81.0% 64.7%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.80e-01 81.0% 88.1%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.53e-01 98.4% 77.8%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 45.0 4.02e-01 81.0% 53.3%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 43.0 3.70e-01 81.0% 47.6%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.43e-01 98.4% 77.1%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 47.0 4.20e-01 92.1% 67.7%
3p26A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 42.0 3.50e-01 76.2% 69.1%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 40.0 3.56e-01 76.2% 58.5%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 47.0 3.42e-01 100.0% 89.2%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.55 41.0 3.89e-01 82.5% 75.3%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 39.0 3.34e-01 82.5% 82.9%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 36.0 2.61e-01 77.8% 96.1%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4147366 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.85 61.0 6.85e-01 76.2% 97.9%
4029082 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 54.0 5.92e-01 73.0% 86.0%
4128902 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 57.0 6.23e-01 76.2% 94.0%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 62.0 6.17e-01 84.1% 80.0%
4574546 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 58.0 5.75e-01 77.8% 83.1%
5025104 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 58.0 6.37e-01 77.8% 98.0%
3740753 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.78 55.0 5.45e-01 74.6% 70.8%
3323530 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.78 57.0 5.67e-01 77.8% 93.8%
2725406 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 69.0 6.32e-01 100.0% 89.0%
3651961 4.1.1.251 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.78 56.0 5.94e-01 77.8% 87.3%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.78 55.0 4.40e-01 74.6% 39.2%
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.77 57.0 4.70e-01 79.4% 45.0%
4881976 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.77 58.0 5.55e-01 92.1% 68.9%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.77 56.0 4.52e-01 87.3% 40.8%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 54.0 5.59e-01 74.6% 78.3%
4200330 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.77 58.0 4.61e-01 88.9% 40.8%
4098445 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.76 59.0 6.05e-01 92.1% 86.7%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 58.0 5.59e-01 81.0% 72.9%
4660107 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 57.0 5.90e-01 81.0% 85.0%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.76 56.0 4.49e-01 87.3% 40.0%
5022491 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.76 54.0 4.93e-01 76.2% 64.7%
3389169 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 61.0 5.55e-01 95.2% 65.9%
3409299 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.76 67.0 6.22e-01 100.0% 81.2%
4547820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.35e-01 93.7% 57.1%
3237859 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 54.0 5.74e-01 76.2% 90.9%
3551576 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.75 54.0 5.17e-01 77.8% 72.0%
3877485 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 57.0 5.21e-01 90.5% 62.4%
3486327 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.84e-01 92.1% 86.7%
3854862 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 61.0 5.34e-01 96.8% 60.0%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 54.0 5.25e-01 77.8% 72.9%
3510526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 52.0 5.51e-01 74.6% 89.1%
3198731 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.74 59.0 4.61e-01 92.1% 41.5%
3477037 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 54.0 5.25e-01 77.8% 92.9%
3721794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 58.0 5.99e-01 92.1% 90.0%
4957350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 55.0 5.50e-01 81.0% 76.9%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 53.0 5.82e-01 76.2% 96.0%
3555930 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.74 65.0 6.30e-01 100.0% 92.9%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.74 55.0 4.00e-01 79.4% 32.1%
4147056 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 61.0 5.20e-01 95.2% 57.0%
3516048 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.22e-01 100.0% 58.0%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 4.64e-01 73.0% 54.1%
3999723 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 4.61e-01 95.2% 38.7%
3907619 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 60.0 5.46e-01 95.2% 67.1%
3712782 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.12e-01 81.0% 67.5%
2893010 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.73 54.0 5.80e-01 79.4% 96.3%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.59e-01 79.4% 86.7%
4372288 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.73 54.0 5.55e-01 81.0% 83.3%
3508415 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 60.0 4.73e-01 95.2% 43.8%
3476179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 62.0 5.42e-01 98.4% 63.2%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.73 59.0 5.87e-01 87.3% 87.7%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 56.0 4.57e-01 82.5% 47.8%
3391558 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 58.0 5.42e-01 100.0% 70.0%
3765126 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 50.0 5.27e-01 71.4% 100.0%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 53.0 5.25e-01 77.8% 95.4%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 62.0 4.38e-01 96.8% 36.0%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.75e-01 85.7% 92.7%
3469800 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 61.0 5.71e-01 95.2% 88.7%
3547084 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 60.0 5.33e-01 95.2% 64.4%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.72 54.0 5.21e-01 79.4% 71.4%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 53.0 5.32e-01 79.4% 81.5%
3881119 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 57.0 5.33e-01 93.7% 70.0%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.72 51.0 5.14e-01 76.2% 73.8%
3535278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 50.0 5.15e-01 73.0% 78.3%
3261395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.36e-01 76.2% 82.8%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.06e-01 79.4% 70.0%
4629022 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.71 54.0 5.26e-01 81.0% 74.3%
3389177 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 58.0 4.96e-01 95.2% 56.0%
4963650 4.1.1.488 beta barrels › SH3 › SH3 › SH3 › DUF7346 0.71 55.0 5.81e-01 93.7% 100.0%
3230082 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 58.0 5.01e-01 93.7% 57.0%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.71 52.0 5.37e-01 77.8% 83.3%
4002896 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 59.0 5.25e-01 95.2% 64.4%
3479037 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.69e-01 96.8% 90.0%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.44e-01 77.8% 89.1%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.71 53.0 5.03e-01 82.5% 68.0%
3763497 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 52.0 5.00e-01 81.0% 92.0%
3840679 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 58.0 5.08e-01 95.2% 61.1%
3562168 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 58.0 5.15e-01 100.0% 64.4%
3229601 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 50.0 5.13e-01 76.2% 80.0%
None 0.69 52.0 2.92e-01 81.0% 6.6%
3881123 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 56.0 5.08e-01 88.9% 65.9%
3920666 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 58.0 5.16e-01 100.0% 65.6%
3584224 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 55.0 4.68e-01 95.2% 53.3%
3230083 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 57.0 5.11e-01 100.0% 65.6%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 47.0 5.03e-01 73.0% 85.2%
3660923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.76e-01 98.4% 87.1%
3875218 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.68 46.0 4.63e-01 71.4% 70.8%
3609629 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 58.0 5.08e-01 95.2% 68.4%
3617111 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 55.0 4.92e-01 93.7% 64.4%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.00e-01 76.2% 81.7%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.67 46.0 4.47e-01 71.4% 65.7%
3484618 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 47.0 4.47e-01 74.6% 82.7%
3492982 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 55.0 4.31e-01 92.1% 55.6%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 4.38e-01 93.7% 56.9%
4003604 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 46.0 3.99e-01 77.8% 81.9%
3407855 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 54.0 4.89e-01 100.0% 67.8%
3858084 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.64 53.0 4.16e-01 93.7% 48.6%
4104915 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.63 44.0 4.48e-01 73.0% 78.3%
3712451 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 43.0 3.53e-01 73.0% 48.0%
3275404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.62e-01 85.7% 85.0%
D3 high residues 147-206
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.70 60.0 5.52e-01 91.7% 91.9%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 57.0 5.49e-01 91.7% 83.8%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.69 61.0 5.55e-01 95.0% 83.1%
2bi0A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 50.0 3.77e-01 81.7% 88.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 5.28e-01 91.7% 79.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 55.0 5.19e-01 100.0% 77.3%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 53.0 4.28e-01 90.0% 86.0%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.64 44.0 3.33e-01 73.3% 41.7%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 49.0 3.91e-01 85.0% 56.2%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.64 57.0 4.73e-01 100.0% 70.2%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 51.0 4.13e-01 88.3% 72.4%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 49.0 3.87e-01 85.0% 68.2%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 50.0 3.56e-01 91.7% 46.9%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 50.0 4.01e-01 88.3% 72.4%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 47.0 4.80e-01 91.7% 86.4%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 46.0 3.91e-01 81.7% 79.2%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 49.0 3.85e-01 88.3% 64.9%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.62 46.0 3.55e-01 83.3% 40.4%
2rsoA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 49.0 4.27e-01 86.7% 57.6%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 46.0 4.33e-01 83.3% 75.0%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.61 48.0 4.01e-01 86.7% 75.0%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 51.0 4.23e-01 95.0% 58.7%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 45.0 3.41e-01 81.7% 74.3%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 47.0 4.56e-01 91.7% 78.6%
2crvA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 47.0 4.11e-01 88.3% 92.5%
2bz0A00 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.59 49.0 3.58e-01 93.3% 81.0%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 44.0 3.28e-01 83.3% 36.5%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 44.0 3.80e-01 85.0% 75.7%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 44.0 3.70e-01 81.7% 89.3%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 43.0 3.59e-01 83.3% 73.5%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 44.0 3.57e-01 85.0% 81.7%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 3.11e-01 83.3% 79.1%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.56 43.0 4.08e-01 98.3% 70.0%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 3.37e-01 83.3% 77.9%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 40.0 3.08e-01 78.3% 76.8%
2bi0A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 41.0 3.20e-01 81.7% 84.4%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.67e-01 96.7% 61.2%
1fmbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 40.0 3.45e-01 80.0% 46.2%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 3.50e-01 86.7% 87.8%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.14e-01 85.0% 67.9%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 38.0 3.88e-01 78.3% 81.7%
4r7vA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 3.02e-01 81.7% 86.6%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.53 44.0 4.15e-01 96.7% 76.6%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.12e-01 83.3% 85.5%
3bvxA05 2.60.40.1360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.36e-01 81.7% 95.8%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.51 38.0 2.59e-01 83.3% 89.1%
2vqpA01 2.70.20.30 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain 0.51 43.0 3.56e-01 100.0% 78.3%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 3.09e-01 85.0% 80.6%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4060846 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 67.0 5.71e-01 90.0% 81.1%
3934278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 69.0 5.43e-01 91.7% 51.3%
3784140 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 64.0 6.68e-01 88.3% 92.7%
3607981 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.32e-01 98.3% 83.8%
3645842 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.76 65.0 5.92e-01 95.0% 77.5%
3848399 4.8.1.24 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.75 67.0 6.35e-01 100.0% 82.9%
3546727 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 65.0 5.36e-01 96.7% 65.7%
3496292 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 58.0 6.01e-01 83.3% 94.5%
3297966 4.25.1.2 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.75 67.0 5.31e-01 100.0% 86.7%
3177469 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 62.0 5.89e-01 91.7% 85.7%
3706730 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.53e-01 91.7% 97.5%
3272197 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 66.0 5.43e-01 100.0% 62.9%
3464303 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.72 61.0 4.47e-01 93.3% 83.2%
3650798 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.19e-01 100.0% 87.0%
3368864 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 63.0 6.12e-01 100.0% 87.7%
3676628 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.71 64.0 5.05e-01 100.0% 70.0%
4586503 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.70 56.0 4.26e-01 86.7% 76.3%
3894481 277.1.1.5 a+b two layers › PX domain › PX domain › PX domain › Vps5 0.70 55.0 3.38e-01 86.7% 67.6%
3800184 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.69 52.0 3.76e-01 81.7% 59.4%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.69 56.0 5.13e-01 90.0% 67.5%
3513396 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.69 52.0 3.72e-01 81.7% 59.4%
4946993 4.1.1.479 beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.68 57.0 5.49e-01 100.0% 80.0%
3970846 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 51.0 4.62e-01 80.0% 82.5%
3937776 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.68 63.0 5.84e-01 100.0% 90.4%
1930750 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.68 50.0 3.73e-01 80.0% 61.9%
4012805 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.68 50.0 3.91e-01 80.0% 67.7%
3253267 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 61.0 5.37e-01 100.0% 72.9%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.66 55.0 5.29e-01 100.0% 80.0%
3554073 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.66 53.0 4.13e-01 88.3% 64.6%
3429751 708.1.1.2 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.66 49.0 4.97e-01 81.7% 81.7%
3616990 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 52.0 4.33e-01 88.3% 59.1%
3903091 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.66 52.0 3.20e-01 88.3% 62.1%
3166240 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 51.0 5.18e-01 85.0% 83.3%
3400775 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 47.0 3.79e-01 78.3% 83.2%
3449744 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.65 54.0 4.73e-01 91.7% 95.6%
3483489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 4.95e-01 91.7% 73.3%
3643907 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.65 52.0 3.83e-01 88.3% 58.7%
160765 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 57.0 5.24e-01 98.3% 89.6%
3744517 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.65 51.0 4.14e-01 88.3% 72.5%
3564807 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.65 50.0 3.80e-01 86.7% 61.3%
3876143 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.65 51.0 4.00e-01 88.3% 65.9%
None 0.65 47.0 2.99e-01 78.3% 38.7%
3656652 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.64 45.0 3.13e-01 73.3% 24.6%
3714021 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.64 57.0 3.42e-01 100.0% 81.9%
3841771 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.63 50.0 3.79e-01 88.3% 64.0%
4443617 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.63 49.0 3.18e-01 86.7% 39.1%
3390600 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.63 41.0 3.82e-01 70.0% 53.3%
3257603 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 49.0 3.99e-01 88.3% 70.8%
3958247 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 43.0 2.98e-01 75.0% 22.2%
3639782 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 48.0 3.83e-01 88.3% 70.8%
4021411 705.1.1.1 beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH 0.61 48.0 3.92e-01 86.7% 78.3%
3961460 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 3.76e-01 91.7% 58.7%
3782925 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 51.0 4.43e-01 95.0% 67.4%
5054019 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 44.0 4.25e-01 80.0% 87.1%
5067458 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.92e-01 83.3% 92.7%
3517264 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 44.0 2.88e-01 81.7% 23.9%
4997059 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.60 50.0 4.73e-01 100.0% 77.3%
2780879 1172.1.1.1 beta barrels › UL131A-like › UL130 C-terminal domain › UL130 C-terminal domain › Gp_UL130 0.56 38.0 3.18e-01 70.0% 42.3%
3539169 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 50.0 3.52e-01 100.0% 70.3%
3577548 331.12.1.0 a+b two layers › TBP-like › YugN-like › YugN-like 0.56 42.0 3.50e-01 81.7% 49.6%
4982336 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.55 46.0 3.19e-01 93.3% 72.9%
3966821 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.54 39.0 3.98e-01 81.7% 78.3%
5002178 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.54 38.0 4.03e-01 88.3% 90.0%
3948605 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 40.0 2.85e-01 81.7% 65.3%
4973777 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.53 39.0 3.03e-01 81.7% 41.8%
3226923 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 39.0 2.47e-01 83.3% 21.7%
3216464 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.52 39.0 3.18e-01 83.3% 90.3%
3520868 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.40e-01 98.3% 91.4%
3607882 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.54e-01 100.0% 74.5%
3211350 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.50 37.0 3.01e-01 88.3% 62.0%
3721174 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.50 35.0 2.87e-01 78.3% 97.9%