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NC_028887.1__YP_009206593.1__AVV02_gp238__00238
Bact-VirNC_028887.1__YP_009206593.1__AVV02_gp238__00238
Identity
- Accession:
- NC_028887 ↗
- Kingdom:
- phage
Quality
71.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Bequatrovirus›
Bacillus_phage_AvesoBmore
TaxID: 1698451
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-60
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.57 | 26.0 | 2.12e-01 | 85.0% | 22.8% |
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 36.0 | 2.82e-01 | 75.0% | 39.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002533 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 39.0 | 3.29e-01 | 91.7% | 39.0% |
| 3355968 | 375.1.1.190 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Fra10Ac1 | 0.54 | 41.0 | 3.48e-01 | 88.3% | 78.3% |
| 3693225 | 3167.1.1.0 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) | 0.54 | 36.0 | 3.58e-01 | 70.0% | 93.8% |
| 3170708 | 632.1.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Pho88 | 0.51 | 37.0 | 2.81e-01 | 93.3% | 32.4% |
| 3406876 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.51 | 42.0 | 2.77e-01 | 100.0% | 49.2% |