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NC_028888.1__YP_009206685.1__CL1_29__00029
Bact-VirNC_028888.1__YP_009206685.1__CL1_29__00029
Identity
- Accession:
- NC_028888 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Taxonomy
TaxID: 1739607
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-132
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16784.11 best | HNHc_6 | 66.8 | 2.80e-18 | 100.0% | 38.7% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 50.0 | 5.94e-01 | 92.5% | 87.3% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 48.0 | 6.12e-01 | 90.0% | 100.0% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 52.0 | 6.06e-01 | 87.5% | 89.7% |
| 1pxyB03 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.67 | 53.0 | 4.66e-01 | 85.0% | 77.1% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.66 | 45.0 | 4.51e-01 | 100.0% | 69.1% |
| 1rt8A04 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.65 | 45.0 | 4.14e-01 | 100.0% | 53.2% |
| 5iduC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 58.0 | 4.61e-01 | 100.0% | 71.7% |
| 2wa5A01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.64 | 46.0 | 4.29e-01 | 100.0% | 59.8% |
| 1tt5B02 | 1.10.10.520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 0.63 | 44.0 | 4.49e-01 | 80.0% | 75.3% |
| 4rm7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.62 | 55.0 | 4.60e-01 | 100.0% | 80.6% |
| 2jaqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 50.0 | 3.75e-01 | 86.3% | 87.8% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.60 | 51.0 | 3.53e-01 | 95.0% | 58.5% |
| 4yozA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 51.0 | 3.98e-01 | 96.2% | 56.7% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.59 | 44.0 | 4.38e-01 | 83.7% | 76.5% |
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 44.0 | 3.30e-01 | 80.0% | 76.8% |
| 1fx0A03 | 1.20.150.20 | Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain | 0.58 | 43.0 | 3.68e-01 | 78.8% | 95.3% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.58 | 49.0 | 4.83e-01 | 95.0% | 100.0% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.57 | 49.0 | 4.74e-01 | 98.8% | 84.8% |
| 3t38A01 | 1.10.8.1060 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain | 0.56 | 43.0 | 4.57e-01 | 87.5% | 93.0% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 42.0 | 4.11e-01 | 81.2% | 73.9% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 42.0 | 4.18e-01 | 100.0% | 78.0% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 42.0 | 4.09e-01 | 100.0% | 73.6% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.55 | 40.0 | 3.51e-01 | 100.0% | 50.0% |
| 3fynA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 42.0 | 3.38e-01 | 81.2% | 56.6% |
| 4yerA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.43e-01 | 98.8% | 35.2% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 42.0 | 4.27e-01 | 87.5% | 85.9% |
| 3rf7A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.54 | 45.0 | 3.69e-01 | 100.0% | 70.9% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 45.0 | 3.67e-01 | 95.0% | 89.2% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 43.0 | 4.33e-01 | 87.5% | 87.3% |
| 4mn0A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 43.0 | 3.35e-01 | 90.0% | 69.6% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.53 | 45.0 | 3.52e-01 | 98.8% | 89.9% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.53 | 45.0 | 3.82e-01 | 100.0% | 78.8% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 38.0 | 3.68e-01 | 100.0% | 69.2% |
| 1exzB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 45.0 | 3.78e-01 | 100.0% | 63.6% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 44.0 | 4.39e-01 | 97.5% | 96.4% |
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 44.0 | 3.95e-01 | 97.5% | 73.9% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589151 | 829.1.1.2 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 | 0.95 | 80.0 | 6.67e-01 | 87.5% | 57.6% |
| 4033673 | 829.1.1.2 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 | 0.92 | 88.0 | 8.62e-01 | 100.0% | 97.6% |
| 3394470 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.68 | 53.0 | 4.83e-01 | 83.7% | 74.3% |
| 3595135 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.62 | 49.0 | 4.51e-01 | 85.0% | 73.3% |
| 4972007 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.62 | 55.0 | 4.59e-01 | 100.0% | 69.3% |
| 3713398 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.62 | 48.0 | 3.88e-01 | 85.0% | 55.6% |
| 3492848 | 193.1.1.21 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › DUF5745 | 0.62 | 48.0 | 4.44e-01 | 85.0% | 80.0% |
| 3241203 | 544.1.1.0 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 | 0.61 | 47.0 | 4.09e-01 | 81.2% | 55.0% |
| 3683603 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 53.0 | 3.32e-01 | 100.0% | 17.8% |
| 3421242 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 52.0 | 3.21e-01 | 100.0% | 15.3% |
| 3282529 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.60 | 48.0 | 4.40e-01 | 86.3% | 78.1% |
| 3959665 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.59 | 47.0 | 4.47e-01 | 85.0% | 86.3% |
| 3190824 | 166.1.1.0 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C | 0.59 | 44.0 | 4.59e-01 | 80.0% | 86.7% |
| 4995939 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.59 | 40.0 | 3.65e-01 | 100.0% | 53.3% |
| 4225802 | 5051.1.1.7 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp | 0.59 | 51.0 | 3.28e-01 | 100.0% | 80.7% |
| 3611284 | 193.1.1.19 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Cluap1 | 0.58 | 45.0 | 4.07e-01 | 85.0% | 96.5% |
| 3953975 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.58 | 46.0 | 4.39e-01 | 85.0% | 87.4% |
| 4452686 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.58 | 47.0 | 3.92e-01 | 91.3% | 95.3% |
| 3459019 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.58 | 42.0 | 3.82e-01 | 100.0% | 54.8% |
| 3928986 | 193.1.1.19 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Cluap1 | 0.58 | 44.0 | 4.09e-01 | 83.7% | 72.4% |
| 3686218 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 3.59e-01 | 71.2% | 90.9% |
| 3740341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 3.36e-01 | 71.2% | 73.3% |
| 4011283 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 3.59e-01 | 71.2% | 90.9% |
| 3824761 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.57 | 42.0 | 4.44e-01 | 82.5% | 90.0% |
| 5030429 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.57 | 42.0 | 3.63e-01 | 78.8% | 70.4% |
| 4675723 | 3290.1.1.1 ↗ | alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › FeoB_Cyto | 0.56 | 43.0 | 4.01e-01 | 100.0% | 66.0% |
| 3909404 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 48.0 | 4.44e-01 | 97.5% | 75.2% |
| 4991204 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 47.0 | 3.46e-01 | 100.0% | 33.3% |
| 5009561 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.56 | 43.0 | 4.24e-01 | 100.0% | 77.6% |
| 4524416 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 42.0 | 3.84e-01 | 100.0% | 61.0% |
| 3675198 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.56 | 46.0 | 3.26e-01 | 91.3% | 78.8% |
| 3970878 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.55 | 48.0 | 3.05e-01 | 100.0% | 82.4% |
| 3444874 | 3788.1.1.14 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › DUF247 | 0.55 | 42.0 | 4.21e-01 | 86.3% | 84.7% |
| 4163021 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.55 | 41.0 | 3.86e-01 | 100.0% | 64.0% |
| 3391350 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 45.0 | 3.82e-01 | 100.0% | 54.6% |
| 5023625 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 40.0 | 3.71e-01 | 100.0% | 62.0% |
| 353472 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 40.0 | 3.58e-01 | 100.0% | 54.8% |
| 5013034 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 41.0 | 3.95e-01 | 100.0% | 71.1% |
| 3932355 | 550.1.1.0 ↗ | alpha complex topology › Her-1 › Her-1 › Her-1 | 0.54 | 41.0 | 3.56e-01 | 82.5% | 56.6% |
| 3591103 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 41.0 | 2.84e-01 | 100.0% | 25.6% |
| 4985449 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 40.0 | 4.00e-01 | 100.0% | 75.3% |
| 3607289 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.54 | 42.0 | 4.28e-01 | 85.0% | 95.0% |
| 4976283 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 39.0 | 3.50e-01 | 100.0% | 53.9% |
| 3371195 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 45.0 | 4.26e-01 | 97.5% | 89.0% |
| 3786400 | 5051.1.1.7 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp | 0.53 | 44.0 | 2.76e-01 | 91.3% | 54.6% |
| 4031014 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 45.0 | 3.23e-01 | 100.0% | 30.8% |
| 3959950 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.52 | 43.0 | 3.26e-01 | 92.5% | 36.5% |
| 3697927 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 37.0 | 2.70e-01 | 78.8% | 26.5% |
| 5042372 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 38.0 | 3.55e-01 | 100.0% | 61.5% |
| 4390907 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.51 | 44.0 | 3.64e-01 | 98.8% | 74.7% |
| 3903602 | 2484.1.1.239 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 | 0.51 | 45.0 | 2.81e-01 | 100.0% | 22.5% |
| 4025989 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.50 | 46.0 | 3.26e-01 | 100.0% | 44.7% |
D2
medium
residues 133-224
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16784.11 best | HNHc_6 | 91.7 | 6.80e-26 | 92.4% | 39.7% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uy8X00 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.58 | 40.0 | 4.34e-01 | 71.7% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4421975 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.69 | 41.0 | 5.10e-01 | 71.7% | 100.0% |
| 4024971 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.68 | 40.0 | 5.02e-01 | 70.7% | 98.2% |
| 3649408 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.60 | 42.0 | 4.51e-01 | 72.8% | 100.0% |
| 4242930 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.59 | 40.0 | 4.13e-01 | 70.7% | 100.0% |
| 2841546 | 4232.1.2.0 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Mitoribosomal protein bL28m | 0.52 | 38.0 | 2.91e-01 | 77.2% | 39.2% |