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NC_028895.1__YP_009207589.1__AVV29_gp087__00124
Bact-VirNC_028895.1__YP_009207589.1__AVV29_gp087__00124
Identity
- Accession:
- NC_028895 ↗
- Kingdom:
- phage
Quality
57.4
mean pLDDT
Taxonomy
TaxID: 1589298
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1028-1189
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.62 | 39.0 | 4.49e-01 | 85.2% | 86.3% |
| 5d2lE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.49e-01 | 72.8% | 95.4% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 39.0 | 4.15e-01 | 74.1% | 95.7% |
| 3zxfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 4.12e-01 | 74.1% | 99.3% |
| 3q9oA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.99e-01 | 88.3% | 86.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009121 | 11.1.1.1285 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF31090 | 0.92 | 87.0 | 8.63e-01 | 97.5% | 98.8% |
| 5052182 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.76e-01 | 70.4% | 93.3% |
| 4011807 | 10.32.1.206 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PTM1-like_N | 0.57 | 41.0 | 4.25e-01 | 74.7% | 91.0% |
| 3503839 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.54 | 33.0 | 3.44e-01 | 82.1% | 63.0% |
| 2630848 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.54 | 39.0 | 4.16e-01 | 73.5% | 95.7% |
| 5056603 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 35.0 | 3.72e-01 | 82.1% | 74.3% |
| 5045890 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 41.0 | 4.31e-01 | 82.1% | 99.3% |
| 3450421 | 9.13.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent | 0.50 | 33.0 | 3.49e-01 | 93.2% | 72.9% |
D2
medium
residues 59-140
Domain cluster:
representative
D3
medium
residues 339-419
Domain cluster:
rep: NC_048776.1__YP_009847622.1__HWC32_gp141__00141__D54-114
D4
medium
residues 660-749
D5
medium
residues 972-1021