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NC_028924.1__YP_009209687.1__AVT43_gp27__00027

Bact-Vir

NC_028924.1__YP_009209687.1__AVT43_gp27__00027

Identity

Accession:
NC_028924 ↗
Kingdom:
phage

Quality

85.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Incheonvirus› Polaribacter_phage_P12002L

TaxID: 1647386

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-132
PDB
Domain cluster: rep: NC_031938.1__YP_009324532.1__BOW78_gp09__00009__D4-122
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.68 44.0 4.65e-01 93.4% 73.4%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.67 46.0 4.69e-01 94.3% 72.6%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 43.0 4.63e-01 91.8% 76.6%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.65 45.0 4.59e-01 95.1% 72.1%
4jzjC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 38.0 4.12e-01 80.3% 68.3%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.63 48.0 5.33e-01 89.3% 100.0%
3beuA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 40.0 4.38e-01 91.8% 80.8%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.59 39.0 4.16e-01 92.6% 77.1%
1vf7F01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.59 40.0 4.36e-01 83.6% 83.3%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.54 46.0 4.38e-01 95.1% 85.1%
2pb7A01 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.53 44.0 3.98e-01 93.4% 80.8%
1zboA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.52 44.0 4.54e-01 90.2% 100.0%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 33.0 3.73e-01 86.1% 86.2%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 26.0 3.11e-01 81.1% 69.9%
2z4hA02 2.40.50.540 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain 0.51 31.0 3.59e-01 99.2% 84.9%
7clyA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 46.0 4.07e-01 99.2% 71.0%
2yx1A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 24.0 2.94e-01 84.4% 72.7%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002659 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 48.0 5.75e-01 89.3% 97.5%
4033712 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 48.0 5.60e-01 89.3% 100.0%
3508717 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 41.0 5.21e-01 92.6% 100.0%
3059162 1.1.13.30 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 0.65 58.0 5.85e-01 96.7% 96.0%
5080512 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 58.0 4.26e-01 99.2% 71.8%
3936663 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 47.0 4.67e-01 87.7% 78.4%
4809346 1.1.13.57 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.61 42.0 4.83e-01 82.8% 100.0%
4929752 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.60 53.0 4.93e-01 98.4% 98.7%
4982153 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 51.0 4.03e-01 95.1% 48.1%
3729936 1.1.9.27 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 0.60 42.0 4.55e-01 93.4% 88.0%
3730216 1.1.9.27 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 0.59 41.0 4.59e-01 91.0% 95.6%
3263398 11.1.1.793 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.58 37.0 3.69e-01 81.1% 60.8%
3504105 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.58 43.0 4.16e-01 95.1% 68.6%
3663381 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.57 48.0 3.67e-01 92.6% 55.0%
3477928 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 35.0 3.32e-01 78.7% 53.1%
3627428 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 40.0 3.93e-01 92.6% 67.4%
3980899 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 44.0 4.65e-01 95.9% 95.5%
3931360 11.1.4.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.55 37.0 4.00e-01 89.3% 80.0%
3639927 1.1.9.27 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 0.55 43.0 4.54e-01 92.6% 94.5%
3669363 11.1.1.389 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C 0.54 41.0 4.10e-01 93.4% 77.7%
3596299 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 30.0 3.19e-01 91.8% 62.9%
5032539 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 29.0 3.55e-01 93.4% 95.4%
3601539 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.52 38.0 3.14e-01 81.1% 40.9%
3868052 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.52 44.0 4.24e-01 95.1% 97.9%
3198319 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 44.0 3.29e-01 99.2% 95.5%
4811057 11.2.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 0.50 44.0 4.54e-01 96.7% 98.3%
D2 high residues 178-362
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.75 48.0 5.58e-01 100.0% 88.7%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.75 48.0 5.56e-01 100.0% 89.4%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.75 46.0 5.45e-01 100.0% 88.4%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.73 49.0 5.60e-01 100.0% 89.3%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.73 47.0 5.48e-01 100.0% 90.1%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.73 41.0 5.12e-01 100.0% 89.3%
4ht1T00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.73 47.0 5.46e-01 100.0% 90.8%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.73 47.0 5.43e-01 100.0% 89.5%
3kq4B04 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.72 37.0 4.68e-01 100.0% 82.0%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.72 48.0 5.62e-01 100.0% 96.2%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.71 50.0 5.55e-01 100.0% 90.4%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.71 44.0 5.02e-01 98.9% 82.1%
4f3jA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.71 46.0 5.15e-01 100.0% 83.9%
2wnoA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.70 38.0 4.70e-01 100.0% 84.1%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.70 49.0 5.46e-01 100.0% 91.0%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 44.0 4.67e-01 99.5% 70.7%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.69 48.0 5.39e-01 100.0% 91.6%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.68 51.0 5.48e-01 100.0% 90.4%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.67 38.0 4.62e-01 96.8% 86.3%
1tnrA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.67 47.0 5.29e-01 100.0% 93.1%
3gf6A00 2.60.120.750 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 0.66 61.0 5.74e-01 100.0% 82.6%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 48.0 5.20e-01 100.0% 90.1%
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.66 35.0 4.66e-01 97.8% 96.9%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 50.0 5.38e-01 100.0% 94.3%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 47.0 5.17e-01 100.0% 93.3%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.18e-01 100.0% 90.6%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 29.0 3.93e-01 96.8% 82.1%
1pgsA01 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.61 39.0 4.53e-01 100.0% 88.9%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 44.0 5.01e-01 98.4% 97.9%
2vvdA00 2.60.120.720 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 4.97e-01 100.0% 92.6%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 42.0 4.37e-01 100.0% 76.4%
1nziA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.60 36.0 4.42e-01 98.4% 95.6%
4l9bA02 2.60.120.1400 Mainly Beta › Sandwich › Jelly Rolls › Viral head domain of polysaccharide receptor-binding protein-like 0.59 54.0 5.19e-01 100.0% 86.4%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.58 54.0 4.81e-01 100.0% 83.5%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 31.0 4.04e-01 98.4% 95.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 4.70e-01 98.9% 88.6%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.57 42.0 4.16e-01 98.4% 72.6%
3vgiA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.57 52.0 4.62e-01 100.0% 80.0%
3hbzA02 2.60.120.890 Mainly Beta › Sandwich › Jelly Rolls › BT2081, beta-jelly-roll domain 0.57 52.0 4.72e-01 100.0% 74.5%
4kq7A02 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.57 45.0 4.31e-01 100.0% 72.5%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 53.0 4.51e-01 100.0% 81.8%
4es8B01 2.60.120.1240 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 4.61e-01 88.1% 99.0%
1w0nA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 36.0 4.34e-01 85.9% 100.0%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 4.52e-01 98.4% 87.4%
7lyuB02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 4.80e-01 89.2% 100.0%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 4.50e-01 100.0% 84.0%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 51.0 4.65e-01 100.0% 95.8%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.53 35.0 3.86e-01 98.9% 82.6%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 4.56e-01 98.4% 89.8%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 50.0 4.62e-01 100.0% 97.4%
6f2sH01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.46e-01 100.0% 80.9%
3m1hD00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 4.59e-01 88.6% 96.6%
2x10A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 4.56e-01 85.9% 98.1%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.53 36.0 4.15e-01 97.8% 96.2%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 3.85e-01 100.0% 64.7%
2bbaA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 44.0 4.46e-01 89.2% 94.1%
3eb7A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 38.0 4.06e-01 96.8% 85.4%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 30.0 3.26e-01 90.3% 64.2%
2py5A03 3.30.1770.10 Alpha Beta › 2-Layer Sandwich › TPR 1 domain of DNA polymerase › TPR 1 domain of DNA polymerase 0.52 24.0 3.17e-01 86.5% 81.3%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 4.25e-01 100.0% 88.2%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 4.21e-01 97.8% 78.3%
6ovbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 38.0 4.10e-01 86.5% 92.2%
2vg9A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 47.0 4.50e-01 99.5% 84.3%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.97e-01 89.7% 87.1%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 4.18e-01 100.0% 83.6%
2e26A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 44.0 4.22e-01 98.9% 82.3%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3883934 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.76 49.0 5.09e-01 100.0% 69.4%
3908506 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.75 48.0 5.50e-01 100.0% 85.0%
4011220 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 47.0 5.61e-01 100.0% 95.2%
3890782 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.73 52.0 5.78e-01 100.0% 91.7%
4266103 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.73 43.0 5.02e-01 97.8% 81.5%
3949369 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 50.0 5.09e-01 100.0% 69.7%
3908103 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.73 46.0 5.40e-01 100.0% 89.2%
3913258 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.73 49.0 5.61e-01 100.0% 90.0%
4627078 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.71 41.0 5.36e-01 96.2% 100.0%
4667107 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.69 50.0 5.52e-01 100.0% 93.8%
3236803 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 38.0 4.96e-01 98.4% 95.2%
4867161 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.69 46.0 5.04e-01 92.4% 81.3%
5035505 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 39.0 4.85e-01 100.0% 89.6%
3570204 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.68 50.0 5.32e-01 100.0% 86.9%
151167 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.68 50.0 5.41e-01 100.0% 90.4%
5058689 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 37.0 4.78e-01 97.3% 96.0%
5083101 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 40.0 4.87e-01 100.0% 90.8%
3893718 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.67 50.0 5.43e-01 100.0% 92.3%
4646750 10.32.1.12 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.67 38.0 4.46e-01 100.0% 80.0%
3661896 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 42.0 4.63e-01 99.5% 78.6%
3269628 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 47.0 4.92e-01 99.5% 78.8%
3562185 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.66 48.0 5.10e-01 100.0% 84.0%
3591145 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 38.0 4.74e-01 100.0% 93.6%
5039545 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 44.0 5.24e-01 90.8% 100.0%
4517189 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.65 46.0 4.95e-01 99.5% 83.1%
3701894 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 37.0 4.38e-01 97.3% 81.6%
4983953 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 44.0 4.67e-01 98.9% 77.6%
5035807 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 43.0 4.62e-01 98.9% 78.7%
3939502 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 39.0 4.72e-01 99.5% 93.9%
4944751 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 39.0 4.67e-01 100.0% 91.7%
3891965 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.64 48.0 5.25e-01 100.0% 92.9%
1258 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.63 35.0 4.29e-01 100.0% 82.6%
3908517 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.63 36.0 4.42e-01 100.0% 88.7%
3701810 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 40.0 4.74e-01 97.3% 96.7%
3880815 10.3.1.14 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › CTHRC1_C 0.62 43.0 4.81e-01 100.0% 91.4%
3219782 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 39.0 4.52e-01 97.8% 86.7%
3897855 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.61 49.0 5.06e-01 100.0% 88.5%
4944599 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 39.0 4.37e-01 99.5% 85.2%
3611465 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 41.0 4.59e-01 100.0% 89.3%
3057120 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.60 50.0 4.88e-01 88.1% 96.0%
5033996 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 50.0 4.59e-01 90.3% 97.6%
3620780 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.58 49.0 4.92e-01 87.6% 97.3%
3741738 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.58 37.0 4.42e-01 98.4% 93.6%
3486154 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.58 37.0 4.23e-01 97.3% 85.0%
4294583 10.2.1.31 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin 0.58 36.0 4.32e-01 99.5% 95.0%
4244782 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.57 36.0 4.18e-01 100.0% 89.6%
4023517 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 40.0 4.54e-01 97.8% 96.3%
5029875 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 44.0 4.47e-01 99.5% 81.1%
3509447 10.32.1.223 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1 0.57 46.0 4.89e-01 98.9% 95.8%
3821996 10.32.1.192 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.57 40.0 3.37e-01 89.2% 40.9%
5005245 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 50.0 4.63e-01 95.1% 97.4%
3993514 10.32.1.6 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.56 42.0 4.47e-01 100.0% 87.9%
4218569 10.32.1.301 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › InhA-like_MAM 0.56 44.0 4.56e-01 98.4% 87.6%
4929162 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 33.0 3.80e-01 99.5% 80.0%
3168473 10.32.1.306 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.55 45.0 4.54e-01 86.5% 96.3%
3894462 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.55 45.0 4.85e-01 87.0% 99.4%
4961996 11.1.1.1403 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1616 0.55 37.0 4.42e-01 100.0% 100.0%
3235629 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 47.0 4.83e-01 100.0% 94.9%
2505858 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.55 41.0 4.05e-01 100.0% 72.1%
3601923 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 40.0 4.05e-01 97.8% 73.7%
3482723 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 33.0 3.89e-01 96.2% 88.3%
4950626 11.1.1.1403 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1616 0.54 38.0 4.05e-01 98.9% 81.6%
3740649 11.1.1.498 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19 0.54 40.0 4.46e-01 98.9% 97.2%
3382614 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 39.0 2.86e-01 100.0% 25.4%
5077592 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 4.20e-01 99.5% 100.0%
3903197 10.32.1.5 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ephrin_lbd 0.53 44.0 4.32e-01 87.0% 86.7%
3538224 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.53 43.0 4.57e-01 99.5% 96.4%
5039139 10.1.2.184 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.53 45.0 4.44e-01 100.0% 86.0%
3942277 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 40.0 4.36e-01 98.4% 96.0%
5082586 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 34.0 4.04e-01 98.4% 99.2%
4995808 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 40.0 4.33e-01 99.5% 93.1%
3400017 10.40.1.0 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain 0.52 41.0 4.39e-01 100.0% 95.0%
4319705 10.32.1.196 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD 0.52 42.0 4.21e-01 87.6% 99.0%
3636445 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 42.0 4.42e-01 87.6% 100.0%
3249076 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 35.0 3.84e-01 96.8% 88.3%
4362871 10.2.1.86 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › But2 0.50 41.0 4.32e-01 99.5% 98.8%
D3 high residues 482-489_672-740
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2egvA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.73 53.0 5.62e-01 100.0% 89.4%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 39.0 4.11e-01 85.7% 62.0%
1dfuP00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.63 56.0 5.26e-01 100.0% 96.8%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.63 50.0 4.72e-01 100.0% 72.8%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 55.0 4.88e-01 100.0% 67.6%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 48.0 4.57e-01 100.0% 69.9%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 4.40e-01 100.0% 71.1%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 55.0 4.29e-01 100.0% 73.3%
1ejeA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 4.05e-01 100.0% 63.0%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 44.0 4.12e-01 97.4% 61.5%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 55.0 4.71e-01 100.0% 66.4%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 4.22e-01 100.0% 72.0%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 4.12e-01 100.0% 65.2%
2qckA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 54.0 4.32e-01 100.0% 74.8%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 54.0 4.06e-01 100.0% 63.4%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 54.0 4.28e-01 100.0% 73.1%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.32e-01 100.0% 74.5%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.30e-01 100.0% 73.7%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.26e-01 100.0% 73.7%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.07e-01 100.0% 63.7%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 47.0 4.62e-01 100.0% 78.3%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.18e-01 100.0% 73.3%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.59 47.0 3.58e-01 100.0% 35.2%
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 3.84e-01 100.0% 59.9%
2w4oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 40.0 4.06e-01 97.4% 72.7%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 4.02e-01 100.0% 72.9%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.56 44.0 3.86e-01 100.0% 54.4%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.64e-01 100.0% 57.4%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 48.0 4.22e-01 100.0% 87.4%
2hw6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 44.0 4.28e-01 96.1% 78.4%
3f3zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 4.23e-01 98.7% 82.9%
1zysA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 43.0 4.06e-01 98.7% 72.6%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 43.0 4.20e-01 98.7% 80.7%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 43.0 4.07e-01 98.7% 73.4%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.53 46.0 4.61e-01 97.4% 94.9%
2xzsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 45.0 4.25e-01 98.7% 80.2%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 44.0 4.23e-01 96.1% 80.9%
3uc4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.93e-01 98.7% 77.6%
2m47A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 32.0 2.60e-01 100.0% 29.4%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.52 46.0 4.04e-01 100.0% 89.6%
2re1A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 33.0 3.40e-01 83.1% 67.6%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 42.0 4.18e-01 97.4% 85.5%
6baoA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 39.0 3.26e-01 84.4% 67.1%
1yxsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 45.0 4.23e-01 98.7% 82.6%
2weiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 41.0 3.95e-01 98.7% 78.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3516172 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.74 43.0 3.14e-01 74.0% 23.2%
3490245 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 41.0 3.88e-01 72.7% 48.9%
3683487 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.68 41.0 3.08e-01 72.7% 26.3%
4062422 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.65 57.0 5.39e-01 100.0% 95.8%
4438946 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 49.0 4.78e-01 100.0% 74.1%
4601397 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.63 55.0 5.21e-01 100.0% 95.8%
4864109 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.62 55.0 5.12e-01 100.0% 95.9%
4886608 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.62 54.0 5.10e-01 100.0% 95.8%
3510186 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.61 54.0 5.10e-01 100.0% 94.7%
4666540 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.61 46.0 4.48e-01 98.7% 74.1%
4949262 1.1.9.45 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3427 0.59 52.0 3.69e-01 100.0% 43.2%
4139867 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 53.0 4.96e-01 100.0% 95.8%
3868227 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 4.07e-01 98.7% 69.5%
5019514 881.2.1.0 ↗ a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.54 48.0 3.93e-01 100.0% 70.3%
4172447 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.27e-01 98.7% 85.3%
3259959 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.93e-01 100.0% 66.0%
4519252 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.53 42.0 3.76e-01 98.7% 59.1%
3219898 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.52 46.0 3.98e-01 98.7% 80.0%
4469190 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 43.0 3.03e-01 92.2% 44.4%
4964696 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.52 39.0 3.52e-01 84.4% 71.3%
4059476 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.50e-01 100.0% 55.0%
4984757 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 38.0 3.69e-01 81.8% 75.6%
4978820 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 38.0 3.91e-01 81.8% 89.3%
5001593 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 41.0 3.42e-01 90.9% 72.9%
D4 medium residues 134-165_371-416_435-464
PDB
Domain cluster: rep: IMGVR_UViG_3300033388_002076-3300033388-Ga0370355_101957510__D114-254
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xz0D00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.54 29.0 3.29e-01 88.9% 67.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253068 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 31.0 3.44e-01 93.5% 76.5%
D5 medium residues 417-434_495-670
PDB
Domain cluster: rep: OP947161.1__WBC28471.1__RPMD05_84__00085__D468-640
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d37A03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.66 22.0 3.96e-01 90.7% 96.7%
3cddB03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.63 21.0 3.74e-01 70.6% 96.6%
1cczA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 21.0 2.96e-01 77.8% 78.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3316523 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.50 34.0 3.18e-01 89.2% 53.5%