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NC_028944.1__YP_009212172.1__QLX47_gp232__00232
Bact-VirNC_028944.1__YP_009212172.1__QLX47_gp232__00232
Identity
- Accession:
- NC_028944 ↗
- Kingdom:
- phage
Quality
81.9
mean pLDDT
Taxonomy
TaxID: 1690431
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-70
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.90 | 69.0 | 4.54e-01 | 80.3% | 22.8% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.82 | 74.0 | 5.21e-01 | 100.0% | 41.5% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 74.0 | 5.01e-01 | 100.0% | 41.0% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.79 | 61.0 | 4.79e-01 | 84.8% | 41.4% |
| 2d1lA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 71.0 | 4.68e-01 | 100.0% | 30.5% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 60.0 | 5.17e-01 | 83.3% | 53.9% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 60.0 | 4.93e-01 | 87.9% | 46.7% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.76 | 50.0 | 4.55e-01 | 74.2% | 51.1% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 60.0 | 4.34e-01 | 95.5% | 31.2% |
| 2lxlA00 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.72 | 50.0 | 3.65e-01 | 72.7% | 28.8% |
| 7cfmR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.72 | 63.0 | 4.13e-01 | 95.5% | 25.5% |
| 1i5pA02 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.70 | 51.0 | 3.54e-01 | 83.3% | 22.6% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.69 | 65.0 | 4.90e-01 | 100.0% | 54.6% |
| 3dmqA08 | 6.10.140.1500 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 53.0 | 4.99e-01 | 93.9% | 71.2% |
| 5hdiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.67 | 51.0 | 3.12e-01 | 81.8% | 35.0% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.63 | 53.0 | 4.76e-01 | 100.0% | 67.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.84 | 76.0 | 6.12e-01 | 100.0% | 54.2% |
| 3518412 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.83 | 75.0 | 5.10e-01 | 100.0% | 49.8% |
| 3682710 | 2004.1.1.529 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 | 0.81 | 64.0 | 3.76e-01 | 89.4% | 11.8% |
| 4562369 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.76 | 66.0 | 6.14e-01 | 100.0% | 77.6% |
| 3820519 | 109.4.1.84 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › API5 | 0.70 | 58.0 | 3.45e-01 | 86.4% | 16.9% |
| 3599454 | 3922.1.1.132 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Enkurin | 0.70 | 50.0 | 4.16e-01 | 74.2% | 98.2% |
| 3889743 | 105.1.1.1 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH | 0.70 | 49.0 | 4.38e-01 | 77.3% | 51.6% |