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NC_028950.1__YP_009212864.1__AVU38_gp015__00015
Bact-VirNC_028950.1__YP_009212864.1__AVU38_gp015__00015
Identity
- Accession:
- NC_028950 ↗
- Kingdom:
- phage
Quality
71.8
mean pLDDT
Taxonomy
TaxID: 1585840
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-151
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.74 | 37.0 | 4.68e-01 | 74.1% | 79.7% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.74 | 64.0 | 4.39e-01 | 95.5% | 43.1% |
| 6nu7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.72 | 62.0 | 4.42e-01 | 94.6% | 48.5% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.69 | 59.0 | 3.90e-01 | 94.6% | 47.9% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 60.0 | 4.19e-01 | 94.6% | 47.6% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 44.0 | 5.19e-01 | 73.2% | 94.7% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 49.0 | 4.80e-01 | 75.0% | 96.7% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 47.0 | 4.72e-01 | 70.5% | 94.6% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.68 | 58.0 | 4.23e-01 | 94.6% | 47.4% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 48.0 | 4.90e-01 | 73.2% | 100.0% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.67 | 57.0 | 4.09e-01 | 94.6% | 46.2% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 46.0 | 4.38e-01 | 71.4% | 80.3% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 46.0 | 4.52e-01 | 72.3% | 88.4% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 46.0 | 4.28e-01 | 73.2% | 75.9% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 56.0 | 4.00e-01 | 94.6% | 40.1% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.65 | 48.0 | 3.59e-01 | 76.8% | 46.5% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.64 | 57.0 | 4.03e-01 | 98.2% | 42.2% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 45.0 | 4.35e-01 | 74.1% | 96.0% |
| 4ok4A02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.62 | 54.0 | 3.83e-01 | 96.4% | 92.5% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 54.0 | 3.87e-01 | 99.1% | 43.5% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 44.0 | 4.15e-01 | 75.0% | 90.2% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.60 | 54.0 | 5.03e-01 | 97.3% | 93.4% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.59 | 46.0 | 4.15e-01 | 94.6% | 61.6% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 49.0 | 4.71e-01 | 89.3% | 93.0% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 34.0 | 3.75e-01 | 75.0% | 70.8% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 47.0 | 4.00e-01 | 100.0% | 53.8% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 4.75e-01 | 91.1% | 98.2% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 38.0 | 3.87e-01 | 74.1% | 82.3% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 45.0 | 3.50e-01 | 96.4% | 47.8% |
| 3rq0A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 47.0 | 3.72e-01 | 98.2% | 67.4% |
| 1vprA03 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 3.38e-01 | 75.0% | 56.7% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.95e-01 | 92.9% | 81.7% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.51 | 41.0 | 3.56e-01 | 83.9% | 81.7% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.51 | 44.0 | 3.64e-01 | 96.4% | 90.7% |
| 3bgaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 43.0 | 3.25e-01 | 92.9% | 94.4% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022489 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.79 | 69.0 | 4.53e-01 | 94.6% | 47.9% |
| 5052931 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 66.0 | 4.49e-01 | 100.0% | 36.2% |
| 4951310 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 62.0 | 4.22e-01 | 94.6% | 38.7% |
| 3935899 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 61.0 | 4.29e-01 | 94.6% | 40.8% |
| 3810646 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.71 | 61.0 | 4.22e-01 | 94.6% | 56.0% |
| 5040052 | 5.1.4.665 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 | 0.71 | 62.0 | 4.18e-01 | 94.6% | 37.5% |
| 5079413 | 5.1.3.272 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP | 0.70 | 63.0 | 4.81e-01 | 100.0% | 54.3% |
| 3291389 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.70 | 45.0 | 3.99e-01 | 77.7% | 46.5% |
| 3924310 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 63.0 | 4.40e-01 | 100.0% | 44.3% |
| 4959715 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 62.0 | 4.33e-01 | 100.0% | 40.0% |
| 4021082 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 60.0 | 4.16e-01 | 94.6% | 46.6% |
| 3663999 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.69 | 59.0 | 4.23e-01 | 94.6% | 51.2% |
| 1949089 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.69 | 48.0 | 4.65e-01 | 71.4% | 81.6% |
| 3790115 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.69 | 62.0 | 4.28e-01 | 100.0% | 49.5% |
| 5033551 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 60.0 | 4.17e-01 | 98.2% | 37.1% |
| 1949057 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.68 | 48.0 | 4.66e-01 | 71.4% | 86.9% |
| 3246345 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.68 | 60.0 | 4.37e-01 | 97.3% | 43.0% |
| 3793856 | 5.1.4.421 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd | 0.68 | 61.0 | 3.69e-01 | 100.0% | 24.6% |
| 3465348 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 57.0 | 4.34e-01 | 92.0% | 44.5% |
| 3427602 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.68 | 59.0 | 4.26e-01 | 95.5% | 41.0% |
| 5022885 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.67 | 62.0 | 4.04e-01 | 100.0% | 26.4% |
| 3821398 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.67 | 58.0 | 4.20e-01 | 93.8% | 43.9% |
| 3937921 | 5.1.3.170 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd | 0.67 | 60.0 | 4.32e-01 | 100.0% | 44.5% |
| 3740914 | 5.1.4.80 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller | 0.67 | 58.0 | 4.04e-01 | 94.6% | 39.2% |
| 3781730 | 5.1.11.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller | 0.67 | 60.0 | 4.18e-01 | 100.0% | 33.8% |
| 3287259 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.67 | 59.0 | 4.28e-01 | 100.0% | 40.3% |
| 3789793 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 3.53e-01 | 98.2% | 21.8% |
| 4028738 | 5.1.4.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel | 0.66 | 60.0 | 4.25e-01 | 100.0% | 38.2% |
| 3213871 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 58.0 | 4.17e-01 | 100.0% | 39.4% |
| 3928054 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 57.0 | 4.44e-01 | 100.0% | 50.6% |
| 3581100 | 5.1.3.170 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd | 0.65 | 58.0 | 4.62e-01 | 100.0% | 82.6% |
| 3438862 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 57.0 | 4.08e-01 | 97.3% | 54.3% |
| 3996653 | 5.1.4.377 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N | 0.65 | 58.0 | 4.14e-01 | 100.0% | 45.9% |
| 3421076 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.65 | 58.0 | 4.26e-01 | 100.0% | 43.3% |
| 5038930 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 57.0 | 3.97e-01 | 99.1% | 39.5% |
| 4950355 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 54.0 | 3.90e-01 | 94.6% | 41.8% |
| 2321284 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 53.0 | 5.31e-01 | 93.8% | 93.9% |
| 3481354 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 55.0 | 3.98e-01 | 100.0% | 40.9% |
| 3620047 | 5.1.4.377 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N | 0.62 | 55.0 | 4.04e-01 | 100.0% | 43.9% |
| 3968296 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 53.0 | 3.92e-01 | 98.2% | 41.2% |
| None | — | 0.62 | 55.0 | 3.96e-01 | 100.0% | 40.6% | |
| 3941202 | 5.1.4.501 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL, ANAPC4_WD40 | 0.62 | 55.0 | 3.78e-01 | 100.0% | 29.4% |
| 3721408 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.61 | 55.0 | 3.76e-01 | 100.0% | 44.7% |
| 4783165 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.59 | 53.0 | 4.65e-01 | 100.0% | 68.8% |
| 4444775 | 63.1.1.5 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › ATG27 | 0.58 | 41.0 | 3.75e-01 | 73.2% | 92.8% |
| 6395 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.58 | 48.0 | 4.64e-01 | 89.3% | 94.5% |
| 3438237 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.58 | 42.0 | 3.36e-01 | 77.7% | 70.2% |
| 3219425 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.57 | 47.0 | 4.58e-01 | 93.8% | 80.8% |
| 2491359 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.55 | 41.0 | 3.85e-01 | 77.7% | 64.7% |
| 3189694 | 9.1.1.33 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF1365 | 0.53 | 44.0 | 3.37e-01 | 92.0% | 65.0% |
| 4506585 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.52 | 44.0 | 4.06e-01 | 96.4% | 86.5% |
| 5079230 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 42.0 | 4.33e-01 | 86.6% | 94.3% |
| 5033887 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.52 | 45.0 | 4.48e-01 | 95.5% | 99.1% |
| 3453561 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.50 | 45.0 | 3.52e-01 | 100.0% | 67.8% |