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NC_028950.1__YP_009212936.1__AVU38_gp087__00087
Bact-VirNC_028950.1__YP_009212936.1__AVU38_gp087__00087
Identity
- Accession:
- NC_028950 ↗
- Kingdom:
- phage
Quality
83.0
mean pLDDT
Taxonomy
TaxID: 1585840
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-110
Domain cluster:
rep: FFC_09252017_16_scaffold_4_prodigal-single.1__X__X__00158__D30-111
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.74 | 62.0 | 6.28e-01 | 90.4% | 98.8% |
| 3tmmA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.67 | 46.0 | 4.24e-01 | 71.1% | 74.3% |
| 4mcoA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.56 | 41.0 | 2.79e-01 | 77.1% | 43.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4376239 | 150.5.1.50 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › EspA_EspE | 0.82 | 75.0 | 5.34e-01 | 100.0% | 41.3% |
| 4420423 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.80 | 73.0 | 5.86e-01 | 100.0% | 66.5% |
| 5041183 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.75 | 66.0 | 5.00e-01 | 94.0% | 47.2% |
| 3613695 | 3922.1.1.230 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC10_N | 0.65 | 57.0 | 4.55e-01 | 95.2% | 83.7% |