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NC_028950.1__YP_009212936.1__AVU38_gp087__00087

Bact-Vir

NC_028950.1__YP_009212936.1__AVU38_gp087__00087

Identity

Accession:
NC_028950 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-110
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.74 62.0 6.28e-01 90.4% 98.8%
3tmmA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.67 46.0 4.24e-01 71.1% 74.3%
4mcoA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.56 41.0 2.79e-01 77.1% 43.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4376239 150.5.1.50 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › EspA_EspE 0.82 75.0 5.34e-01 100.0% 41.3%
4420423 5094.1.1.1 a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.80 73.0 5.86e-01 100.0% 66.5%
5041183 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.75 66.0 5.00e-01 94.0% 47.2%
3613695 3922.1.1.230 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC10_N 0.65 57.0 4.55e-01 95.2% 83.7%