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NC_028953.1__YP_009213452.1__AVV70_gp202__00235

Bact-Vir

Identity

Accession:: NC_028953 ↗
Kingdom:: phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Omegavirus› Mycobacterium_phage_MiaZeal

TaxID: 1567005

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-48

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ehwA00	6.10.140.1220	Special › Helix non-globular › Helix Hairpins ›	0.80	69.0	5.19e-01	100.0%	49.6%
4h63K00	1.10.287.3490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.74	63.0	4.91e-01	100.0%	44.9%
2y39A00	1.20.120.1490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.74	63.0	4.64e-01	91.3%	47.3%
1urfA00	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.74	63.0	5.33e-01	100.0%	65.4%
1t9kA01	1.20.120.420	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1	0.73	55.0	3.95e-01	84.8%	27.9%
1yxrA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.71	58.0	4.96e-01	91.3%	94.6%
2jdiG01	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.65	59.0	5.32e-01	100.0%	100.0%
4ly4A00	3.20.20.370	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase	0.60	48.0	2.89e-01	87.0%	14.5%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3597517	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.87	59.0	3.88e-01	71.7%	18.9%
3388164	633.31.1.0 ↗	alpha bundles › Bromodomain-like › Four-helical bundle insertion domain in pyruvate-ferredoxin oxidoreductase › Four-helical bundle insertion domain in pyruvate-ferredoxin oxidoreductase	0.86	60.0	5.35e-01	78.3%	52.3%
4032446	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.79	60.0	4.99e-01	100.0%	49.3%
5053090	605.1.1.1 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA	0.79	70.0	6.39e-01	100.0%	85.0%
3862389	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.76	64.0	5.45e-01	100.0%	68.8%
3365240	3562.1.1.11 ↗	alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG	0.72	59.0	4.14e-01	100.0%	28.4%
3412985	101.1.11.104 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF3512	0.71	58.0	5.31e-01	89.1%	90.0%
5056427	3843.1.1.38 ↗	alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › T4SS_pilin	0.71	60.0	4.64e-01	100.0%	44.5%
3595088	109.4.1.22 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N	0.66	58.0	3.32e-01	97.8%	21.9%
3233029	3711.1.1.24 ↗	alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF4473	0.66	50.0	4.18e-01	87.0%	48.2%
3624054	3730.1.1.1 ↗	alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › PDCD10_N	0.64	46.0	4.16e-01	84.8%	52.9%
3929986	3730.1.1.1 ↗	alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › PDCD10_N	0.63	43.0	3.90e-01	73.9%	50.8%