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NC_028957.1__YP_009213843.1__AVV66_gp006__00006
Bact-VirNC_028957.1__YP_009213843.1__AVV66_gp006__00006
Identity
- Accession:
- NC_028957 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Gaprivervirus›
Escherichia_phage_vB_EcoM_VR26
TaxID: 1567029
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-111
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vvlA02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.56 | 42.0 | 3.29e-01 | 82.8% | 43.7% |
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.52 | 37.0 | 3.20e-01 | 76.3% | 75.6% |
| 1eyuA00 | 3.40.210.10 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › PVUII Endonuclease, subunit A | 0.51 | 35.0 | 3.05e-01 | 73.1% | 68.6% |
D2
high
residues 165-249
Domain cluster:
rep: OK283618.1__UCR92177.1__LPLM1_00042__00042__D87-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02945.22 best | Endonuclease_7 | 68.9 | 3.90e-19 | 100.0% | 82.9% |