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NC_028957.1__YP_009213843.1__AVV66_gp006__00006

Bact-Vir

NC_028957.1__YP_009213843.1__AVV66_gp006__00006

Identity

Accession:
NC_028957 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-111
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vvlA02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.56 42.0 3.29e-01 82.8% 43.7%
4akgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.52 37.0 3.20e-01 76.3% 75.6%
1eyuA00 3.40.210.10 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › PVUII Endonuclease, subunit A 0.51 35.0 3.05e-01 73.1% 68.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3721113 109.4.1.851 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTI1 0.50 33.0 2.42e-01 98.9% 22.9%
D2 high residues 165-249
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02945.22 best Endonuclease_7 68.9 3.90e-19 100.0% 82.9%