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YP_009216746.1
Arc-VirNC_028992__YP_009216746.1__AVT97-gp40__00040
Identity
- Accession:
- NC_028992 ↗
- Protein ID:
- YP_009216746.1 ↗
- Kingdom:
- archaea
Quality
69.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-111
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.85 | 67.0 | 5.75e-01 | 100.0% | 55.7% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.82 | 74.0 | 6.89e-01 | 96.6% | 95.3% |
| 1ezvC00 | 1.20.810.10 | Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C | 0.82 | 75.0 | 4.81e-01 | 100.0% | 45.2% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.82 | 61.0 | 6.14e-01 | 81.8% | 78.2% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.81 | 61.0 | 6.34e-01 | 100.0% | 84.3% |
| 3pf0A00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.81 | 75.0 | 4.98e-01 | 100.0% | 35.5% |
| 3vadA01 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.81 | 69.0 | 5.65e-01 | 92.0% | 64.7% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.81 | 71.0 | 5.86e-01 | 94.3% | 73.5% |
| 1uruA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.80 | 64.0 | 4.78e-01 | 85.2% | 84.2% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.79 | 72.0 | 5.35e-01 | 100.0% | 53.5% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.78 | 68.0 | 5.88e-01 | 95.5% | 88.2% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.77 | 62.0 | 4.32e-01 | 85.2% | 32.6% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.76 | 67.0 | 5.89e-01 | 100.0% | 71.4% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.76 | 67.0 | 6.22e-01 | 100.0% | 83.2% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.75 | 54.0 | 6.11e-01 | 83.0% | 100.0% |
| 4hkrA00 | 1.20.140.140 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Calcium release-activated calcium channel protein Orai | 0.75 | 61.0 | 4.92e-01 | 87.5% | 66.1% |
| 4iggB06 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.74 | 66.0 | 5.00e-01 | 100.0% | 54.0% |
| 3rfyA02 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.74 | 66.0 | 6.22e-01 | 100.0% | 92.5% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.74 | 66.0 | 5.84e-01 | 100.0% | 86.0% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.74 | 57.0 | 5.45e-01 | 84.1% | 91.3% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.73 | 59.0 | 5.47e-01 | 88.6% | 75.4% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.73 | 57.0 | 5.11e-01 | 84.1% | 75.4% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.72 | 64.0 | 5.69e-01 | 100.0% | 88.4% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.72 | 64.0 | 5.80e-01 | 100.0% | 99.2% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.71 | 62.0 | 5.53e-01 | 100.0% | 87.0% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.71 | 63.0 | 5.71e-01 | 100.0% | 95.8% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.71 | 54.0 | 5.09e-01 | 83.0% | 70.9% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.71 | 56.0 | 4.83e-01 | 83.0% | 86.2% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.70 | 48.0 | 5.05e-01 | 70.5% | 98.7% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.70 | 54.0 | 5.71e-01 | 83.0% | 94.7% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.69 | 52.0 | 5.58e-01 | 80.7% | 93.4% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 45.0 | 4.89e-01 | 93.2% | 80.0% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.68 | 46.0 | 4.06e-01 | 70.5% | 87.6% |
| 4btfA01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.67 | 51.0 | 4.92e-01 | 81.8% | 75.0% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 48.0 | 5.14e-01 | 73.9% | 95.9% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.67 | 50.0 | 5.32e-01 | 85.2% | 92.1% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.66 | 53.0 | 4.21e-01 | 87.5% | 92.4% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.66 | 59.0 | 5.31e-01 | 100.0% | 98.4% |
| 3rvyA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.66 | 56.0 | 5.23e-01 | 96.6% | 85.1% |
| 1hw1A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.66 | 59.0 | 4.94e-01 | 100.0% | 84.1% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.66 | 48.0 | 4.95e-01 | 77.3% | 95.3% |
| 1oaoC01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.65 | 52.0 | 4.69e-01 | 85.2% | 83.3% |
| 6yttA01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.64 | 50.0 | 4.85e-01 | 84.1% | 99.0% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 51.0 | 5.22e-01 | 87.5% | 95.2% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.64 | 55.0 | 5.62e-01 | 96.6% | 98.8% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 52.0 | 4.80e-01 | 87.5% | 69.9% |
| 3rh3A01 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.64 | 58.0 | 5.03e-01 | 100.0% | 79.7% |
| 3akaA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 51.0 | 4.26e-01 | 88.6% | 67.9% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.63 | 55.0 | 4.98e-01 | 100.0% | 84.0% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.63 | 54.0 | 4.26e-01 | 93.2% | 75.0% |
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 54.0 | 4.22e-01 | 96.6% | 60.1% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 43.0 | 4.04e-01 | 72.7% | 80.0% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.62 | 47.0 | 4.37e-01 | 80.7% | 80.7% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.61 | 53.0 | 4.80e-01 | 100.0% | 89.4% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.58 | 41.0 | 3.60e-01 | 84.1% | 49.6% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 47.0 | 3.11e-01 | 94.3% | 38.4% |
| 1ldjA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.53 | 41.0 | 3.65e-01 | 84.1% | 58.4% |
| 2gh9A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 44.0 | 3.41e-01 | 97.7% | 70.8% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614754 | 5.1.4.301 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7 | 0.86 | 69.0 | 4.14e-01 | 84.1% | 16.6% |
| 3230496 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.86 | 67.0 | 6.89e-01 | 81.8% | 100.0% |
| 4659393 | 109.4.1.937 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EDRF1 | 0.81 | 75.0 | 4.75e-01 | 100.0% | 33.6% |
| 4370662 | 601.2.1.6 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Cytochrom_B562 | 0.81 | 73.0 | 7.02e-01 | 96.6% | 98.0% |
| 3173272 | 633.15.1.1 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N › BCDHK_Adom3 | 0.79 | 72.0 | 5.67e-01 | 96.6% | 63.5% |
| 3609141 | 633.15.1.1 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N › BCDHK_Adom3 | 0.79 | 69.0 | 5.32e-01 | 93.2% | 53.0% |
| 3647455 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.79 | 69.0 | 5.51e-01 | 93.2% | 60.6% |
| 4020519 | 633.15.1.0 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N | 0.79 | 69.0 | 5.57e-01 | 93.2% | 66.3% |
| 3583786 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.79 | 72.0 | 6.37e-01 | 100.0% | 82.4% |
| 3797421 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.79 | 62.0 | 3.67e-01 | 83.0% | 21.4% |
| 3434167 | 601.1.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PGG | 0.79 | 65.0 | 5.14e-01 | 87.5% | 61.8% |
| 3638072 | 633.15.1.1 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N › BCDHK_Adom3 | 0.78 | 68.0 | 5.73e-01 | 93.2% | 74.3% |
| 3453285 | 3562.1.1.11 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG | 0.77 | 63.0 | 5.45e-01 | 87.5% | 69.6% |
| 4192155 | 601.1.1.43 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Serendipity_A | 0.77 | 69.0 | 6.24e-01 | 100.0% | 82.5% |
| 3532071 | 109.4.1.937 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EDRF1 | 0.77 | 70.0 | 5.10e-01 | 100.0% | 54.5% |
| 3233893 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.77 | 70.0 | 6.51e-01 | 100.0% | 85.5% |
| 4314019 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.77 | 69.0 | 4.80e-01 | 100.0% | 38.6% |
| 3800850 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 61.0 | 4.66e-01 | 84.1% | 52.6% |
| 5010969 | 5069.1.1.105 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF973 | 0.76 | 69.0 | 5.79e-01 | 100.0% | 65.5% |
| 54292 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.75 | 62.0 | 5.65e-01 | 88.6% | 74.8% |
| 4004623 | 192.5.1.15 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › FxsA | 0.75 | 60.0 | 5.50e-01 | 84.1% | 72.7% |
| 3789338 | 633.15.1.1 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N › BCDHK_Adom3 | 0.75 | 64.0 | 5.05e-01 | 93.2% | 65.9% |
| 3613499 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.75 | 67.0 | 5.45e-01 | 100.0% | 62.4% |
| 3905854 | 633.15.1.1 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N › BCDHK_Adom3 | 0.75 | 64.0 | 5.17e-01 | 93.2% | 61.2% |
| 3578270 | 2008.1.1.94 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5614 | 0.74 | 61.0 | 4.67e-01 | 87.5% | 54.7% |
| 4954045 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.74 | 52.0 | 5.80e-01 | 81.8% | 94.2% |
| 4029967 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.74 | 60.0 | 5.44e-01 | 86.4% | 72.2% |
| 3601796 | 3817.1.1.0 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 | 0.73 | 61.0 | 5.80e-01 | 87.5% | 82.0% |
| 5054146 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 52.0 | 5.98e-01 | 78.4% | 100.0% |
| 3283506 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.73 | 66.0 | 6.22e-01 | 100.0% | 91.4% |
| 3576254 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 57.0 | 3.49e-01 | 85.2% | 14.6% |
| 3346621 | 192.29.1.115 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF599 | 0.73 | 65.0 | 4.92e-01 | 98.9% | 63.8% |
| 3782470 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.73 | 58.0 | 5.37e-01 | 87.5% | 67.8% |
| 4994051 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.72 | 64.0 | 5.91e-01 | 100.0% | 93.8% |
| 2075013 | 601.2.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › 7tm_1,Cytochrom_B562 | 0.72 | 56.0 | 5.70e-01 | 84.1% | 100.0% |
| 3495945 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.72 | 64.0 | 5.87e-01 | 100.0% | 87.0% |
| 4595958 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.71 | 56.0 | 5.25e-01 | 85.2% | 93.6% |
| 5060802 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.71 | 52.0 | 5.31e-01 | 85.2% | 80.0% |
| 3928004 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 60.0 | 6.03e-01 | 93.2% | 96.7% |
| 4134938 | 601.3.1.14 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PF27870 | 0.71 | 62.0 | 5.71e-01 | 100.0% | 74.8% |
| 4989900 | 1030.1.1.0 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 | 0.71 | 62.0 | 5.46e-01 | 100.0% | 65.9% |
| 3382019 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.70 | 55.0 | 4.65e-01 | 83.0% | 57.9% |
| 3782787 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.70 | 57.0 | 6.11e-01 | 85.2% | 100.0% |
| 4854386 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.70 | 54.0 | 5.14e-01 | 80.7% | 79.4% |
| 3175618 | 3220.1.1.0 ↗ | alpha complex topology › ISWI one complex protein 3 › ISWI one complex protein 3 › ISWI one complex protein 3 | 0.69 | 57.0 | 3.61e-01 | 92.0% | 61.9% |
| 4956012 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.69 | 54.0 | 5.16e-01 | 85.2% | 79.0% |
| 5016532 | 611.6.1.1 ↗ | alpha bundles › N-cbl like › PT26-6P helical domain › PT26-6P helical domain › PT26-6P_helical | 0.69 | 61.0 | 5.27e-01 | 100.0% | 92.9% |
| 3931107 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.69 | 54.0 | 4.80e-01 | 86.4% | 80.8% |
| 4277306 | 4974.1.1.0 ↗ | alpha bundles › CRISPR-Cas system first helical domain › CRISPR-Cas system first helical domain › CRISPR-Cas system RNase C2c2 first helical domain | 0.68 | 58.0 | 4.94e-01 | 94.3% | 57.9% |
| 4602904 | 6091.1.1.0 ↗ | alpha bundles › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase | 0.68 | 53.0 | 5.39e-01 | 89.8% | 87.1% |
| 4303437 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.67 | 56.0 | 3.98e-01 | 93.2% | 98.9% |
| 3378749 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.66 | 58.0 | 5.52e-01 | 100.0% | 82.9% |
| 3973242 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.65 | 51.0 | 4.40e-01 | 85.2% | 64.0% |
| None | — | 0.65 | 56.0 | 3.80e-01 | 92.0% | 33.2% | |
| 4881188 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.64 | 56.0 | 4.78e-01 | 100.0% | 77.2% |
| 3737294 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.64 | 44.0 | 4.02e-01 | 71.6% | 55.8% |
| 3258290 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.63 | 49.0 | 5.23e-01 | 85.2% | 98.7% |
| 3845927 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.63 | 44.0 | 3.71e-01 | 72.7% | 60.7% |
| 3801367 | 611.2.1.0 ↗ | alpha bundles › N-cbl like › N-terminal domain of cbl (N-cbl) › N-terminal domain of cbl (N-cbl) | 0.62 | 51.0 | 4.58e-01 | 88.6% | 75.8% |
| 4993098 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.62 | 54.0 | 5.26e-01 | 100.0% | 97.0% |
| 3770541 | 611.2.1.0 ↗ | alpha bundles › N-cbl like › N-terminal domain of cbl (N-cbl) › N-terminal domain of cbl (N-cbl) | 0.61 | 46.0 | 4.36e-01 | 81.8% | 81.8% |
| 4466183 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.57 | 44.0 | 4.17e-01 | 83.0% | 68.6% |
| 4357437 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 41.0 | 2.82e-01 | 79.5% | 56.8% |
| 3514002 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 46.0 | 3.93e-01 | 100.0% | 73.1% |
| 5006043 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.52 | 43.0 | 4.18e-01 | 95.5% | 95.0% |