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NC_028995.1__YP_009216822.1__AVV48_gp54__00054

Bact-Vir

NC_028995.1__YP_009216822.1__AVV48_gp54__00054

Identity

Accession:
NC_028995 ↗
Kingdom:
phage

Quality

74.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acinetobacter_phage_phiAC-1

TaxID: 1229760

Cluster

View cluster (241 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-147
PDB
Domain cluster: rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22764.2 best E217_Gp32 36.1 6.50e-09 92.4% 78.5%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.68 63.0 5.91e-01 100.0% 85.6%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 48.0 4.62e-01 100.0% 63.9%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 50.0 5.15e-01 99.2% 81.5%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 57.0 5.72e-01 99.2% 92.7%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 49.0 5.19e-01 100.0% 89.1%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 34.0 4.06e-01 93.9% 75.6%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.81e-01 100.0% 78.2%
3dmbA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 49.0 4.77e-01 100.0% 76.7%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.61 38.0 4.18e-01 90.9% 76.9%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.59 23.0 3.31e-01 85.6% 74.6%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 49.0 4.80e-01 100.0% 81.6%
2oz4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 34.0 3.81e-01 87.1% 78.4%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 51.0 4.56e-01 100.0% 82.7%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 50.0 4.40e-01 100.0% 73.3%
1jeyA02 2.40.290.10 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › 0.52 43.0 4.43e-01 97.7% 93.7%
2l25A00 3.30.2000.20 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.51 44.0 4.38e-01 97.0% 89.4%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.50 46.0 3.93e-01 100.0% 82.9%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944178 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.95 77.0 8.24e-01 97.0% 94.8%
3942828 1.1.13.39 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 0.86 82.0 7.91e-01 100.0% 93.1%
5003885 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.79 73.0 7.06e-01 100.0% 89.7%
4873215 1.1.13.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.78 71.0 6.94e-01 100.0% 90.0%
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 68.0 6.91e-01 98.5% 95.4%
3023894 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.75 69.0 6.61e-01 98.5% 91.3%
4157825 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 66.0 6.71e-01 100.0% 96.2%
3289594 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.73 55.0 5.09e-01 100.0% 62.4%
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 68.0 6.40e-01 100.0% 92.3%
4057590 1.1.5.86 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 0.73 51.0 5.05e-01 99.2% 67.9%
3942090 1.1.5.77 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube 0.72 66.0 6.06e-01 100.0% 78.2%
3096576 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 65.0 6.13e-01 99.2% 86.2%
2468519 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 51.0 5.68e-01 93.9% 97.1%
4441129 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.69 46.0 4.85e-01 91.7% 74.2%
4606765 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.68 43.0 4.66e-01 92.4% 74.5%
2387782 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.68 62.0 5.73e-01 100.0% 85.7%
5040331 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 62.0 6.06e-01 100.0% 94.5%
4974640 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 53.0 5.23e-01 100.0% 82.0%
4273561 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.65 46.0 4.58e-01 92.4% 71.1%
5083300 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.64 59.0 5.75e-01 100.0% 94.5%
3988859 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.63 39.0 4.29e-01 78.8% 76.2%
3602499 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.60 50.0 5.05e-01 100.0% 89.2%
5026275 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 34.0 4.08e-01 87.1% 88.9%
4929515 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 50.0 4.92e-01 100.0% 89.0%
5067070 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.55 49.0 4.80e-01 100.0% 90.0%
4992907 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.55 48.0 4.53e-01 100.0% 80.0%
5027270 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 49.0 4.49e-01 100.0% 75.4%
4988254 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 47.0 4.28e-01 100.0% 70.6%
4977763 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.52 48.0 4.52e-01 100.0% 85.8%
4958989 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.52 47.0 4.50e-01 100.0% 85.2%
4968263 1.1.5.91 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C 0.51 46.0 3.93e-01 100.0% 63.2%