←Back to structures

NC_029008.1__YP_009218171.1__XO28_0038__00038

Bact-Vir

NC_029008.1__YP_009218171.1__XO28_0038__00038

Identity

Accession:
NC_029008 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rockvillevirus› Bacillus_phage_phi4J1

TaxID: 1643326

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-47
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7v8fB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.81 66.0 5.01e-01 97.4% 39.1%
2zetC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.79 69.0 4.69e-01 100.0% 30.5%
1zbdB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.79 69.0 4.81e-01 100.0% 37.4%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.72 60.0 5.45e-01 100.0% 72.7%
2innB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.68 54.0 3.07e-01 100.0% 21.3%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 44.0 3.26e-01 71.8% 25.5%
4kfzA02 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.64 51.0 4.42e-01 94.9% 60.0%
2vp7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 48.0 4.30e-01 94.9% 81.8%
5xfoA02 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 47.0 4.40e-01 94.9% 62.5%
3qdrB00 2.30.30.970 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.52e-01 89.7% 95.9%
2ysmA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.60 44.0 3.39e-01 97.4% 31.5%
3pe5A00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.60 44.0 2.72e-01 84.6% 72.6%
6nifA01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.59 42.0 2.73e-01 79.5% 20.1%
2fclA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.57 45.0 3.15e-01 97.4% 84.0%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.57 40.0 2.64e-01 79.5% 20.9%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.56 43.0 3.07e-01 97.4% 87.3%
5nqdA01 3.30.200.200 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 42.0 2.87e-01 89.7% 77.3%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.15e-01 84.6% 85.6%
7bkea01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 38.0 3.16e-01 74.4% 51.4%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 40.0 3.56e-01 87.2% 86.2%
6n59A02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 38.0 3.14e-01 79.5% 63.1%
3sooA01 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.53 36.0 3.19e-01 100.0% 39.1%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.11e-01 82.1% 67.8%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 39.0 3.36e-01 84.6% 69.1%
2mhyA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.52 38.0 3.50e-01 100.0% 57.9%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.52 40.0 2.41e-01 89.7% 53.7%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.52 39.0 2.92e-01 89.7% 30.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 2.66e-01 82.1% 41.4%
3h6eB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 39.0 2.97e-01 84.6% 44.4%
2drpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.52 35.0 3.61e-01 100.0% 82.4%
1r94A00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.51 36.0 2.96e-01 87.2% 50.5%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 2.85e-01 82.1% 68.8%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3549240 5.1.4.253 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_Gbeta 0.87 70.0 3.96e-01 97.4% 9.1%
3735240 376.1.1.114 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf_RING-like 0.86 71.0 6.14e-01 97.4% 60.0%
3938379 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.84 73.0 6.21e-01 100.0% 69.2%
3705738 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.84 73.0 6.35e-01 100.0% 65.0%
5013313 377.1.3.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.84 66.0 6.86e-01 94.9% 100.0%
4977157 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.84 72.0 6.93e-01 100.0% 88.9%
3297110 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.83 67.0 4.92e-01 89.7% 36.0%
4959094 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.83 67.0 6.10e-01 97.4% 67.3%
3846283 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.82 72.0 6.67e-01 100.0% 78.0%
None — 0.81 71.0 4.62e-01 100.0% 56.4%
3643916 375.1.1.235 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADD_ATRX 0.81 67.0 6.69e-01 100.0% 92.5%
3468455 376.1.3.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › ADD_ATRX 0.80 67.0 6.70e-01 100.0% 92.5%
3566304 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 69.0 6.88e-01 97.4% 95.0%
4466003 376.1.3.44 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Siva 0.80 67.0 5.75e-01 97.4% 75.4%
5033522 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 67.0 6.19e-01 97.4% 76.0%
3491199 376.1.3.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › ADD_ATRX 0.78 66.0 6.60e-01 100.0% 95.0%
3232605 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 62.0 6.46e-01 89.7% 100.0%
3275045 377.1.1.4 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA 0.78 66.0 6.31e-01 100.0% 84.4%
3211768 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 62.0 4.67e-01 97.4% 38.1%
4959095 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.76 56.0 5.57e-01 84.6% 80.0%
5068785 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 59.0 5.95e-01 92.3% 87.5%
3743792 377.1.1.4 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA 0.75 64.0 4.89e-01 100.0% 49.5%
3403532 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 57.0 5.82e-01 89.7% 97.1%
3665314 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 61.0 6.13e-01 94.9% 97.5%
3252512 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 57.0 5.85e-01 87.2% 100.0%
3646133 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 60.0 5.85e-01 94.9% 82.2%
3394910 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 59.0 6.10e-01 89.7% 100.0%
3744636 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.74 58.0 4.58e-01 97.4% 40.0%
3642367 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.74 60.0 5.79e-01 92.3% 100.0%
5010149 377.1.1.131 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TRASH_HVO_1752_C 0.72 55.0 5.56e-01 92.3% 87.5%
3259913 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 57.0 4.75e-01 100.0% 49.3%
4670436 375.1.1.284 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27208 0.72 59.0 5.92e-01 100.0% 97.5%
3207695 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 53.0 5.07e-01 92.3% 70.0%
5028122 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 59.0 4.12e-01 97.4% 29.2%
3255059 375.1.1.297 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-MYND 0.71 53.0 5.60e-01 89.7% 100.0%
3534273 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.70 57.0 5.72e-01 94.9% 95.0%
4336402 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 58.0 3.70e-01 100.0% 28.3%
4943801 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.70 57.0 5.75e-01 97.4% 95.0%
3688034 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.70 55.0 4.29e-01 100.0% 38.0%
3679252 376.1.3.24 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › NSD_PHD 0.69 57.0 5.12e-01 100.0% 76.7%
5024734 375.1.1.323 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Arc_trans_TRASH 0.69 55.0 5.56e-01 97.4% 95.0%
3559714 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.69 53.0 5.16e-01 92.3% 88.9%
3907976 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.69 54.0 5.29e-01 97.4% 88.9%
3919489 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.68 54.0 5.47e-01 97.4% 97.5%
5007944 377.1.1.126 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH 0.68 57.0 5.69e-01 100.0% 97.5%
4985634 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.67 56.0 4.88e-01 100.0% 84.1%
3845449 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.67 52.0 5.14e-01 97.4% 84.4%
3748946 807.1.1.5 ↗ a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › zf-FCS 0.67 51.0 4.45e-01 92.3% 54.3%
5041606 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.65 55.0 4.75e-01 100.0% 60.0%
3907983 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.65 50.0 4.92e-01 94.9% 88.9%
5031930 375.8.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.64 49.0 4.97e-01 94.9% 100.0%
3426696 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.64 50.0 4.96e-01 97.4% 88.4%
3541608 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.64 50.0 4.88e-01 94.9% 84.4%
5049855 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.64 48.0 4.49e-01 97.4% 63.3%
3907975 377.1.1.50 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 0.64 49.0 4.81e-01 97.4% 88.9%
3248965 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.63 51.0 4.52e-01 94.9% 91.7%
2875038 3993.1.1.1 ↗ few secondary structure elements › C-P lyase subunit PhnJ C-terminal Zn-binding domain › C-P lyase subunit PhnJ C-terminal Zn-binding domain › C-P lyase subunit PhnJ C-terminal Zn-binding domain › PhnJ 0.62 46.0 4.47e-01 84.6% 80.4%
4026828 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.61 43.0 2.84e-01 79.5% 21.6%
5083603 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.60 48.0 3.46e-01 100.0% 45.0%
3429713 386.1.1.212 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-AN1 0.60 45.0 4.56e-01 94.9% 92.5%
2066836 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.60 48.0 4.01e-01 100.0% 84.6%
3205804 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.59 42.0 2.76e-01 82.1% 20.0%
3392409 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.58 40.0 2.68e-01 79.5% 21.2%
4961224 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.57 44.0 3.92e-01 100.0% 90.0%
151131 316.1.1.21 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit 0.57 44.0 3.08e-01 94.9% 84.2%
3194944 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.57 40.0 2.59e-01 82.1% 17.8%
4028432 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.56 38.0 2.52e-01 79.5% 21.9%
3698506 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.55 38.0 2.49e-01 79.5% 19.1%
3533128 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.54 38.0 2.85e-01 76.9% 68.2%
3281207 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.54 40.0 3.17e-01 82.1% 71.1%
3877553 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.54 39.0 3.02e-01 82.1% 88.0%
4980135 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.93e-01 82.1% 65.7%
4977549 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.54 40.0 3.62e-01 100.0% 90.0%
4594782 2002.1.1.291 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM-barrel_MTC6 0.53 40.0 2.37e-01 87.2% 36.9%
3223453 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.53 39.0 2.97e-01 84.6% 84.8%
3304083 80.1.1.0 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain 0.53 39.0 3.24e-01 92.3% 41.2%
3610348 376.1.2.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF26235 0.53 38.0 3.45e-01 100.0% 61.3%
4190768 60.1.2.1 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku 0.51 37.0 2.39e-01 87.2% 25.7%
D2 high residues 54-144
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6d6zA02 3.40.50.11440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain 0.58 41.0 3.09e-01 73.6% 38.1%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 3.82e-01 86.8% 92.6%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 4.43e-01 92.3% 97.2%
2ihmB03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 38.0 3.58e-01 71.4% 93.0%
2z0rA00 3.40.1350.90 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › Uncharacterised protein PF11572, DUF3234 0.55 38.0 3.78e-01 72.5% 100.0%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.96e-01 84.6% 97.3%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 33.0 3.89e-01 93.4% 98.3%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.79e-01 100.0% 57.3%
1h3mB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 43.0 3.31e-01 90.1% 83.0%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.79e-01 97.8% 67.0%
3vhrA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 3.29e-01 91.2% 49.8%
5e37A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 37.0 3.81e-01 94.5% 80.2%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.79e-01 91.2% 84.4%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 32.0 3.42e-01 89.0% 74.7%
1we8A01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.50 32.0 3.33e-01 83.5% 69.0%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 4.00e-01 100.0% 83.3%
1vpdA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.50 43.0 3.84e-01 94.5% 83.2%
4kt7A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.50 40.0 3.10e-01 90.1% 78.0%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3874582 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 58.0 5.96e-01 100.0% 89.4%
3540919 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 57.0 5.88e-01 100.0% 89.4%
4145524 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.66 35.0 4.10e-01 95.6% 72.3%
3785655 109.26.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains 0.60 43.0 3.49e-01 74.7% 68.0%
3262125 102.1.3.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain 0.60 48.0 4.19e-01 86.8% 83.6%
3625937 101.1.2.216 ↗ alpha arrays › HTH › HTH › winged helix domain › CED4_WHD 0.57 35.0 2.96e-01 98.9% 36.0%
3477432 282.1.1.0 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.56 39.0 3.05e-01 96.7% 32.8%
4961270 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.55 49.0 4.67e-01 98.9% 90.5%
4358890 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.53 45.0 4.25e-01 97.8% 80.0%
3285760 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 44.0 3.59e-01 98.9% 48.3%
4997952 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 4.54e-01 98.9% 100.0%
4962051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 3.77e-01 98.9% 61.5%
4950787 101.1.2.554 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30184 0.51 40.0 4.02e-01 94.5% 82.1%
5037625 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 42.0 4.01e-01 97.8% 79.0%
3688927 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.50 38.0 3.21e-01 80.2% 72.9%