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NC_029017.1__YP_009219019.1__AVU12_gp070__00070
Bact-VirNC_029017.1__YP_009219019.1__AVU12_gp070__00070
Identity
- Accession:
- NC_029017 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Luzseptimavirus›
Pseudomonas_phage_KPP21
TaxID: 1678082
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-55
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 55.0 | 4.21e-01 | 82.7% | 71.3% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.70 | 49.0 | 4.26e-01 | 75.0% | 69.0% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 57.0 | 5.21e-01 | 100.0% | 68.5% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 5.16e-01 | 100.0% | 82.5% |
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 5.27e-01 | 98.1% | 97.9% |
| 4l7nA01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.64 | 56.0 | 4.13e-01 | 100.0% | 62.2% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.86e-01 | 90.4% | 93.3% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 4.42e-01 | 100.0% | 57.3% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.62 | 53.0 | 4.64e-01 | 100.0% | 70.7% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 44.0 | 2.93e-01 | 78.8% | 19.3% |
| 2h7bA01 | 1.20.120.1110 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain | 0.60 | 48.0 | 4.16e-01 | 100.0% | 69.8% |
| 1lciA04 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 49.0 | 4.10e-01 | 98.1% | 71.7% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 48.0 | 4.34e-01 | 88.5% | 70.6% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.58 | 41.0 | 3.14e-01 | 80.8% | 34.0% |
| 2j16A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 45.0 | 3.54e-01 | 100.0% | 36.8% |
| 2r0bA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 43.0 | 3.33e-01 | 100.0% | 32.5% |
| 2r4gA02 | 1.10.10.1970 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TERT catalytic subunit-like | 0.56 | 44.0 | 4.12e-01 | 100.0% | 68.8% |
| 2nt2A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 45.0 | 3.43e-01 | 100.0% | 34.5% |
| 2i6jA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 44.0 | 3.32e-01 | 100.0% | 32.3% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 43.0 | 4.10e-01 | 100.0% | 84.3% |
| 3nnqA00 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.53 | 41.0 | 3.58e-01 | 96.2% | 51.6% |
| 4eqyA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.51 | 41.0 | 3.85e-01 | 96.2% | 100.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.51 | 40.0 | 3.83e-01 | 86.5% | 72.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966184 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.81 | 72.0 | 5.88e-01 | 100.0% | 54.7% |
| 3598088 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 68.0 | 5.11e-01 | 100.0% | 43.8% |
| 164077 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.74 | 62.0 | 5.13e-01 | 100.0% | 61.4% |
| 3339561 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.73 | 47.0 | 3.70e-01 | 96.2% | 34.0% |
| 4025194 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.97e-01 | 100.0% | 90.9% |
| 3251025 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 61.0 | 5.60e-01 | 100.0% | 74.3% |
| 5082532 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 48.0 | 4.36e-01 | 75.0% | 52.9% |
| 5072225 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 5.66e-01 | 100.0% | 90.0% |
| 3784677 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.69 | 56.0 | 3.81e-01 | 100.0% | 30.9% |
| 3297063 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 56.0 | 4.70e-01 | 100.0% | 57.0% |
| 3274011 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 57.0 | 5.36e-01 | 98.1% | 86.2% |
| 3839043 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.68 | 58.0 | 4.05e-01 | 100.0% | 28.6% |
| 3967708 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.67 | 54.0 | 4.69e-01 | 96.2% | 60.0% |
| 3595754 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.67 | 55.0 | 4.87e-01 | 100.0% | 74.1% |
| 3735293 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.67 | 56.0 | 3.62e-01 | 100.0% | 25.4% |
| 3244407 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.66 | 52.0 | 5.04e-01 | 100.0% | 81.7% |
| 5028122 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 52.0 | 4.07e-01 | 100.0% | 38.5% |
| 5030252 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.65 | 52.0 | 4.40e-01 | 100.0% | 50.0% |
| 3976331 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.65 | 54.0 | 4.40e-01 | 100.0% | 66.4% |
| 3897679 | 148.1.3.361 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › WH_MCM3_C | 0.65 | 53.0 | 4.99e-01 | 96.2% | 90.8% |
| 3226082 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.64 | 47.0 | 3.70e-01 | 76.9% | 44.5% |
| 3587004 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.64 | 55.0 | 3.95e-01 | 100.0% | 33.6% |
| 4998572 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 51.0 | 4.58e-01 | 100.0% | 61.2% |
| 3858057 | 101.42.1.1 ↗ | alpha arrays › HTH › CC2 domain in SUN proteins › CC2 domain in SUN proteins › HTH_SUN2 | 0.62 | 53.0 | 4.80e-01 | 100.0% | 74.7% |
| 4677046 | 3625.1.1.1 ↗ | alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › Cmr2_hel_dom2 | 0.61 | 51.0 | 4.60e-01 | 96.2% | 100.0% |
| 3740038 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.61 | 48.0 | 4.93e-01 | 96.2% | 98.0% |
| 4276274 | 198.2.1.1 ↗ | alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId | 0.59 | 48.0 | 4.56e-01 | 100.0% | 87.7% |
| 3577450 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.58 | 50.0 | 3.76e-01 | 100.0% | 92.9% |
| 3394666 | 2007.2.3.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Tc-R-P | 0.57 | 48.0 | 3.30e-01 | 100.0% | 37.6% |