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NC_029025.1__YP_009219686.1__AVT66_gp58__00058

Bact-Vir

NC_029025.1__YP_009219686.1__AVT66_gp58__00058

Identity

Accession:
NC_029025 ↗
Kingdom:
phage

Quality

74.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-69
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07129.18 best DUF1381 65.2 4.40e-18 62.1% 93.2%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.56 43.0 2.98e-01 86.4% 93.9%
3t91B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.56 40.0 2.89e-01 78.8% 51.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4525886 109.4.1.1360 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p 0.56 45.0 2.63e-01 90.9% 29.7%
4212370 7527.1.1.1 a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.55 42.0 2.93e-01 86.4% 94.4%
4472559 2005.1.1.30 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › BshC 0.54 47.0 3.07e-01 100.0% 43.9%
4091487 1.1.10.3 beta barrels › cradle loop barrel › RIFT-related › Surface presentation of antigens (SPOA) › FliMN_C_rel 0.53 27.0 2.57e-01 98.5% 35.3%
3589779 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 35.0 2.77e-01 74.2% 58.0%