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NC_029033.1__YP_009220336.1__RU58_00035__00035
Bact-VirNC_029033.1__YP_009220336.1__RU58_00035__00035
Identity
- Accession:
- NC_029033 ↗
- Kingdom:
- phage
Quality
70.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-58
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23978.2 best | DUF7303 | 35.5 | 1.10e-08 | 100.0% | 25.9% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gd8A00 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.70 | 60.0 | 4.86e-01 | 100.0% | 93.3% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 5.47e-01 | 100.0% | 95.3% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.63 | 47.0 | 3.44e-01 | 80.8% | 38.3% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.01e-01 | 100.0% | 44.7% |
| 3mr7A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.63 | 52.0 | 3.74e-01 | 100.0% | 61.8% |
| 2zpaA03 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 52.0 | 3.57e-01 | 100.0% | 60.3% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 52.0 | 3.92e-01 | 100.0% | 44.5% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 45.0 | 3.81e-01 | 80.8% | 54.4% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.27e-01 | 100.0% | 77.6% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 52.0 | 3.91e-01 | 100.0% | 46.2% |
| 2jtvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.65e-01 | 100.0% | 78.5% |
| 2vugA05 | 3.30.70.3360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 43.0 | 4.43e-01 | 80.8% | 87.5% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 3.94e-01 | 100.0% | 51.3% |
| 1m0sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 44.0 | 4.09e-01 | 86.5% | 66.7% |
| 1ldjA06 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.58e-01 | 100.0% | 98.5% |
| 2fsrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 47.0 | 3.48e-01 | 100.0% | 52.0% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.58 | 48.0 | 3.44e-01 | 100.0% | 51.9% |
| 2hh2A00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 40.0 | 3.66e-01 | 76.9% | 65.8% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 47.0 | 3.45e-01 | 100.0% | 56.3% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 47.0 | 4.40e-01 | 100.0% | 85.1% |
| 2fl4A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 47.0 | 3.88e-01 | 100.0% | 82.7% |
| 3n5lA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 46.0 | 3.55e-01 | 100.0% | 39.0% |
| 3shpA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 46.0 | 3.40e-01 | 100.0% | 89.8% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.56 | 46.0 | 4.09e-01 | 100.0% | 81.2% |
| 3pzjB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 46.0 | 3.29e-01 | 100.0% | 54.6% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.39e-01 | 100.0% | 33.9% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 40.0 | 3.64e-01 | 82.7% | 63.7% |
| 3im9A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.55 | 40.0 | 3.63e-01 | 80.8% | 56.8% |
| 4fpvB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 44.0 | 2.93e-01 | 100.0% | 21.4% |
| 3fzqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 45.0 | 3.58e-01 | 100.0% | 92.2% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 38.0 | 3.19e-01 | 80.8% | 51.0% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.06e-01 | 100.0% | 26.4% |
| 3mpoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 41.0 | 3.38e-01 | 92.3% | 91.6% |
| 2gj2A00 | 3.30.70.2070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain | 0.52 | 38.0 | 3.51e-01 | 100.0% | 57.0% |
| 5wt3A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 39.0 | 2.80e-01 | 86.5% | 48.1% |
| 2krhA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.52 | 43.0 | 3.78e-01 | 100.0% | 83.5% |
| 5deqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.74e-01 | 100.0% | 84.3% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 38.0 | 3.22e-01 | 82.7% | 54.2% |
| 1ng4A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.51 | 38.0 | 2.87e-01 | 84.6% | 92.9% |
| 3lp8A04 | 3.90.600.10 | Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain | 0.51 | 37.0 | 3.14e-01 | 80.8% | 60.2% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.32e-01 | 100.0% | 60.0% |
| 1vk3A04 | 3.30.70.1670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formylglycinamide ribonucleotide amidotransferase, C-terminal domain | 0.50 | 41.0 | 3.50e-01 | 100.0% | 97.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4300980 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.63 | 53.0 | 3.52e-01 | 100.0% | 53.6% |
| None | — | 0.63 | 53.0 | 3.56e-01 | 100.0% | 54.7% | |
| None | — | 0.63 | 53.0 | 3.31e-01 | 100.0% | 55.9% | |
| 5078043 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.63 | 54.0 | 3.44e-01 | 100.0% | 46.3% |
| 3811675 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.63 | 53.0 | 3.29e-01 | 100.0% | 53.4% |
| 4125501 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.62 | 52.0 | 3.48e-01 | 100.0% | 53.6% |
| 3378678 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.62 | 44.0 | 3.89e-01 | 76.9% | 62.4% |
| 5006442 | 213.1.1.120 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT10_TcmA_helicase | 0.62 | 52.0 | 2.96e-01 | 100.0% | 18.9% |
| 5054647 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.62 | 52.0 | 3.47e-01 | 100.0% | 50.6% |
| 4203506 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.62 | 51.0 | 3.41e-01 | 100.0% | 51.4% |
| 4301054 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.62 | 51.0 | 3.45e-01 | 100.0% | 54.8% |
| 4217939 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.62 | 51.0 | 3.45e-01 | 100.0% | 53.0% |
| None | — | 0.62 | 52.0 | 3.40e-01 | 100.0% | 50.0% | |
| 4970837 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.62 | 52.0 | 3.38e-01 | 100.0% | 45.9% |
| 3971309 | 213.1.1.3 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Autoind_synth | 0.61 | 54.0 | 3.62e-01 | 100.0% | 29.0% |
| 4114968 | 213.1.1.32 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 | 0.61 | 51.0 | 3.39e-01 | 100.0% | 50.2% |
| 3972927 | 7523.1.1.17 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC | 0.61 | 52.0 | 3.76e-01 | 100.0% | 36.1% |
| 3609468 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 4.32e-01 | 100.0% | 81.2% |
| 5023057 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.60 | 43.0 | 3.96e-01 | 80.8% | 56.0% |
| 4029151 | 320.2.1.0 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain | 0.59 | 48.0 | 4.73e-01 | 100.0% | 95.0% |
| 3963083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 50.0 | 3.78e-01 | 100.0% | 53.3% |
| 4014134 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 47.0 | 3.49e-01 | 100.0% | 34.7% |
| 4881297 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.59 | 41.0 | 3.50e-01 | 75.0% | 64.8% |
| 3593252 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 48.0 | 3.36e-01 | 100.0% | 46.8% |
| 3365659 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.58 | 41.0 | 3.47e-01 | 75.0% | 64.4% |
| 3997936 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 42.0 | 3.80e-01 | 80.8% | 58.7% |
| 3970675 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 42.0 | 2.95e-01 | 80.8% | 31.1% |
| 4337810 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.55 | 45.0 | 3.10e-01 | 100.0% | 25.5% |
| 4930777 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 3.82e-01 | 100.0% | 73.3% |
| 1824495 | 2484.1.1.61 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 | 0.53 | 38.0 | 2.75e-01 | 80.8% | 31.5% |
| 3176195 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 39.0 | 3.35e-01 | 84.6% | 64.4% |
| 3423154 | 213.1.1.73 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › IDM1_C | 0.52 | 41.0 | 3.38e-01 | 100.0% | 79.2% |
| 3544047 | 101.1.2.7 ↗ | alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind | 0.52 | 43.0 | 3.47e-01 | 100.0% | 73.0% |
| 2538977 | 304.51.1.5 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Csy4 | 0.51 | 38.0 | 3.18e-01 | 80.8% | 55.3% |
| 5075649 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.60e-01 | 90.4% | 65.1% |
| 4947605 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.51 | 41.0 | 3.76e-01 | 100.0% | 85.0% |
| 5014544 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.51 | 41.0 | 3.14e-01 | 100.0% | 58.6% |
D2
high
residues 134-222
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23978.2 best | DUF7303 | 126.4 | 1.50e-36 | 100.0% | 44.7% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 43.0 | 4.26e-01 | 93.3% | 62.8% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 44.0 | 4.14e-01 | 93.3% | 58.5% |
| 2v50D07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.65 | 40.0 | 3.94e-01 | 93.3% | 57.9% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 4.15e-01 | 93.3% | 60.2% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 4.15e-01 | 93.3% | 60.8% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 40.0 | 4.07e-01 | 93.3% | 65.9% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 38.0 | 3.91e-01 | 92.1% | 67.1% |
| 3drxB03 | 3.30.70.2000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 32.0 | 3.78e-01 | 93.3% | 88.2% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 37.0 | 3.76e-01 | 93.3% | 64.8% |
| 4lg1B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 40.0 | 3.06e-01 | 100.0% | 31.9% |
| 5kycB02 | 2.20.210.10 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily | 0.53 | 29.0 | 3.61e-01 | 96.6% | 90.6% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 32.0 | 3.42e-01 | 100.0% | 72.0% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.50 | 39.0 | 3.50e-01 | 100.0% | 58.0% |
| 2b81C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.50 | 38.0 | 2.75e-01 | 86.5% | 95.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4023676 | 3156.3.1.0 ↗ | beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family | 0.64 | 42.0 | 3.63e-01 | 100.0% | 42.1% |
| 3600590 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 38.0 | 3.64e-01 | 93.3% | 53.3% |
| 3683250 | 304.112.1.3 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoN | 0.61 | 35.0 | 3.58e-01 | 93.3% | 55.6% |
| 3783532 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.60 | 37.0 | 3.95e-01 | 93.3% | 70.0% |
| 3658421 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.57 | 32.0 | 3.48e-01 | 91.0% | 65.3% |
| 5007871 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 38.0 | 3.78e-01 | 94.4% | 66.3% |
| 3488030 | 11.1.1.592 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig3 | 0.55 | 34.0 | 3.10e-01 | 100.0% | 47.8% |
| 3604108 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 46.0 | 4.14e-01 | 98.9% | 89.6% |
| 3698645 | 101.1.2.123 ↗ | alpha arrays › HTH › HTH › winged helix domain › Paf67 | 0.51 | 39.0 | 3.89e-01 | 100.0% | 77.9% |
| 4977974 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 43.0 | 3.80e-01 | 93.3% | 67.7% |