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NC_029042.1__YP_009220810.1__SP38_66__00066

Bact-Vir

NC_029042.1__YP_009220810.1__SP38_66__00066

Identity

Accession:
NC_029042 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Kuttervirus› Salmonella_phage_38

TaxID: 1654891

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-71
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 46.0 4.15e-01 91.5% 58.7%
2ijzA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.60 48.0 4.29e-01 91.5% 70.1%
2h41A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 3.99e-01 93.0% 60.0%
2oseA00 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.56 40.0 2.99e-01 77.5% 90.8%
1x5lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.76e-01 94.4% 64.8%
4uwqB00 2.60.40.2470 Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain 0.54 39.0 3.42e-01 93.0% 49.5%
4aefA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.70e-01 97.2% 61.1%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 44.0 3.76e-01 98.6% 61.1%
4bzyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.82e-01 94.4% 70.8%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.51 37.0 3.64e-01 78.9% 84.8%
6rpxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.24e-01 80.3% 57.6%
3fg1D03 3.10.450.60 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.37e-01 85.9% 77.2%
8bxrA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.54e-01 94.4% 65.5%
1y8tA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 38.0 3.65e-01 84.5% 81.8%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.07e-01 84.5% 84.7%
1o5lA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 43.0 3.56e-01 95.8% 58.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1166485 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.65 58.0 4.92e-01 97.2% 75.4%
3980600 11.1.1.42 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C 0.60 41.0 3.92e-01 87.3% 60.0%
5062142 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.58 39.0 3.56e-01 93.0% 51.6%
4011055 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 3.68e-01 93.0% 62.5%
5060212 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.65e-01 94.4% 56.0%
5079078 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 43.0 4.12e-01 98.6% 72.9%
3893021 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 40.0 3.67e-01 94.4% 57.0%
5082727 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 3.71e-01 94.4% 58.0%
3623113 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.54 35.0 3.34e-01 91.5% 55.3%
5050313 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 37.0 3.51e-01 91.5% 58.9%
3619674 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 37.0 3.37e-01 94.4% 53.7%
3486314 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 4.25e-01 94.4% 92.9%
4972098 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 3.73e-01 94.4% 63.0%
3577440 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.51 43.0 3.69e-01 95.8% 90.4%
3236478 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 44.0 3.49e-01 98.6% 62.4%
5061498 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 43.0 2.78e-01 95.8% 30.5%
D2 medium residues 191-261
PDB
Domain cluster: rep: KU682439.2__AMQ65897.1__AAY80_267__00237__D399-459
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.63 40.0 4.24e-01 90.1% 73.0%
1nvpD02 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.60 38.0 4.35e-01 90.1% 95.7%
1nh2D02 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.59 37.0 4.27e-01 88.7% 93.8%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 34.0 3.03e-01 84.5% 38.8%
1nh2C00 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.58 37.0 4.09e-01 91.5% 92.0%
2l0cA00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 39.0 3.57e-01 90.1% 55.7%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 34.0 2.57e-01 88.7% 24.6%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 32.0 3.22e-01 80.3% 52.1%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 47.0 2.96e-01 97.2% 21.2%
1tr8A01 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.53 33.0 3.63e-01 80.3% 82.7%
3zx7A01 2.60.120.980 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.28e-01 88.7% 79.2%
1uyvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.52 44.0 3.02e-01 100.0% 26.0%
3lkxB00 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.51 31.0 3.48e-01 83.1% 79.6%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 38.0 2.91e-01 93.0% 30.5%
4werA02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 40.0 3.20e-01 88.7% 73.2%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 36.0 3.60e-01 90.1% 72.4%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589732 4166.1.1.2 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N 0.61 56.0 4.30e-01 100.0% 77.4%
3342595 9.23.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin 0.61 44.0 3.32e-01 100.0% 31.2%
3797626 74.1.1.0 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.60 38.0 4.17e-01 90.1% 83.3%
2770992 74.1.1.2 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › TFIIA 0.60 40.0 4.23e-01 93.0% 81.7%
4028824 74.1.1.0 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.55 37.0 4.01e-01 87.3% 92.6%
3828471 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.54 38.0 3.15e-01 98.6% 39.6%
3339690 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.54 38.0 3.10e-01 98.6% 39.3%
5030516 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 33.0 2.98e-01 88.7% 41.9%
4656478 2.21.1.2 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › C2c1_WED-II 0.52 44.0 3.35e-01 93.0% 40.6%
4939421 3053.1.1.1 ↗ beta barrels › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › PmbA_TldD_3rd 0.52 39.0 2.74e-01 94.4% 24.3%
3938111 283.1.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.51 40.0 2.87e-01 93.0% 47.4%
4020691 3124.1.1.0 ↗ beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain 0.51 32.0 3.39e-01 85.9% 73.3%
3312580 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.51 44.0 2.98e-01 98.6% 66.8%
3274073 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.51 36.0 3.27e-01 85.9% 54.7%
3596851 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 3.69e-01 85.9% 72.2%
5082492 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.50 37.0 3.56e-01 84.5% 67.1%
D3 medium residues 277-365_422-436
PDB
Domain cluster: rep: MN988519.1__QIG70811.1__EVB91_260__00240__D385-502
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 53.0 5.74e-01 84.6% 96.6%
1wosA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.66 45.0 4.89e-01 82.7% 86.0%
4paaA05 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.66 44.0 4.96e-01 80.8% 91.1%
1f60A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 49.0 4.85e-01 79.8% 96.3%
1r5bA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 49.0 4.89e-01 81.7% 95.5%
2dyiA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.64 41.0 4.52e-01 93.3% 81.0%
1nrkA03 2.40.30.160 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 47.0 4.49e-01 78.8% 100.0%
3p26A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 48.0 4.75e-01 82.7% 97.3%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.62 44.0 4.66e-01 100.0% 83.7%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 47.0 4.11e-01 79.8% 80.1%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.61 43.0 4.53e-01 81.7% 82.4%
3mcaA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 47.0 4.78e-01 82.7% 93.1%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 45.0 4.07e-01 79.8% 81.2%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 45.0 4.04e-01 79.8% 81.6%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 46.0 4.03e-01 79.8% 81.4%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.60 43.0 4.49e-01 95.2% 80.4%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 47.0 4.81e-01 84.6% 93.2%
3girA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.60 41.0 4.50e-01 76.9% 93.6%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 44.0 3.88e-01 79.8% 80.7%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.59 40.0 4.25e-01 91.3% 78.5%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 46.0 3.87e-01 84.6% 75.3%
3tfiA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.58 45.0 3.15e-01 84.6% 34.4%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 46.0 3.87e-01 86.5% 91.1%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 43.0 4.16e-01 83.7% 95.8%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 41.0 4.33e-01 77.9% 96.8%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 45.0 3.73e-01 88.5% 88.7%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 43.0 4.28e-01 90.4% 96.5%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 38.0 3.26e-01 84.6% 46.3%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.92e-01 84.6% 86.5%
3rbgD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.66e-01 74.0% 92.2%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4210849 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.76 57.0 6.22e-01 81.7% 95.3%
4398429 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.69 51.0 5.65e-01 78.8% 98.8%
4200507 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.69 49.0 5.54e-01 76.0% 96.2%
4362502 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 49.0 5.51e-01 76.0% 98.7%
4401809 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.68 47.0 5.06e-01 91.3% 82.2%
3510907 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 52.0 5.57e-01 84.6% 95.5%
4301091 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 51.0 5.45e-01 83.7% 92.2%
3171970 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 51.0 5.39e-01 79.8% 96.7%
4274453 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.67 49.0 5.31e-01 80.8% 94.1%
4075660 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.67 47.0 5.11e-01 84.6% 90.5%
4327412 1.1.8.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.66 46.0 5.10e-01 72.1% 92.5%
5077659 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.66 50.0 4.96e-01 80.8% 96.4%
4205951 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 47.0 4.89e-01 94.2% 81.1%
5047459 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.65 45.0 4.86e-01 82.7% 87.1%
4452870 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 46.0 4.94e-01 92.3% 84.4%
3598857 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.65 52.0 4.96e-01 85.6% 91.7%
4567650 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.65 51.0 4.99e-01 84.6% 79.1%
4203993 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 45.0 4.74e-01 91.3% 78.9%
4063137 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 45.0 4.84e-01 92.3% 83.3%
4194151 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 44.0 4.75e-01 92.3% 82.2%
4025330 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.64 45.0 4.87e-01 82.7% 90.6%
3608683 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.63 50.0 4.66e-01 85.6% 86.2%
3599398 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.63 49.0 5.04e-01 83.7% 91.0%
3801941 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.62 46.0 4.45e-01 77.9% 83.5%
4087903 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.61 42.0 4.54e-01 91.3% 83.3%
1171020 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.60 45.0 4.66e-01 78.8% 90.6%
4974855 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.59 45.0 3.89e-01 80.8% 80.6%
5059044 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 39.0 4.03e-01 79.8% 77.9%
3269851 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 4.06e-01 83.7% 76.2%
3516562 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.55 41.0 3.70e-01 91.3% 57.1%
3226414 11.1.3.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like 0.55 43.0 2.84e-01 85.6% 30.7%
3653487 4.1.1.324 ↗ beta barrels › SH3 › SH3 › SH3 › Nodulin_C 0.53 40.0 4.28e-01 84.6% 92.2%
3321290 11.1.1.902 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N 0.52 39.0 3.85e-01 79.8% 79.1%
5055839 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.52 40.0 3.97e-01 83.7% 99.1%
5038729 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 36.0 3.62e-01 71.2% 100.0%
3818610 4.1.1.324 ↗ beta barrels › SH3 › SH3 › SH3 › Nodulin_C 0.51 40.0 4.24e-01 85.6% 94.6%
4959198 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.50 43.0 3.89e-01 91.3% 94.2%
D4 medium residues 386-421_437-474
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ayoA00 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.69 61.0 5.05e-01 97.3% 61.5%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.69 59.0 4.75e-01 98.6% 60.4%
5jpnC01 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.69 62.0 5.09e-01 100.0% 63.9%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 60.0 5.32e-01 97.3% 82.1%
1cfmA01 2.60.40.830 Mainly Beta › Sandwich › Immunoglobulin-like › Cytochrome f large domain 0.67 56.0 4.23e-01 95.9% 52.9%
2z1pA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 58.0 4.75e-01 98.6% 61.3%
3esmA00 2.60.40.2230 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775 0.65 57.0 4.65e-01 97.3% 59.4%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 56.0 4.56e-01 98.6% 63.8%
2f68X01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 58.0 4.73e-01 100.0% 64.5%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.65 55.0 4.19e-01 100.0% 41.5%
2pmwB02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.64 56.0 4.12e-01 100.0% 37.5%
3au0A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 55.0 4.48e-01 100.0% 65.1%
2f68X02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 54.0 4.25e-01 95.9% 61.7%
2edmA00 2.60.40.2770 Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like 0.64 55.0 4.33e-01 98.6% 93.2%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 53.0 4.82e-01 95.9% 70.5%
2ww8A02 2.60.40.2110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 53.0 3.98e-01 95.9% 53.5%
2woyA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 54.0 4.34e-01 100.0% 67.7%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.63 54.0 4.57e-01 100.0% 78.0%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 4.49e-01 97.3% 79.2%
4uypA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 55.0 4.51e-01 98.6% 65.7%
4xotA03 2.40.30.250 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 54.0 5.15e-01 98.6% 97.7%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.62 53.0 4.43e-01 100.0% 93.6%
3bpsA02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.61 52.0 4.29e-01 100.0% 52.7%
1x53A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 44.0 3.72e-01 77.0% 96.9%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.12e-01 98.6% 73.3%
2cwrA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 49.0 4.56e-01 97.3% 70.1%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 52.0 4.76e-01 98.6% 85.3%
2vvfA02 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 4.43e-01 98.6% 99.2%
4b60A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.27e-01 100.0% 63.6%
3q2wA05 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.60 49.0 4.56e-01 95.9% 85.0%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.60 47.0 4.45e-01 89.2% 100.0%
3kptA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.22e-01 100.0% 61.0%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.44e-01 97.3% 89.4%
2oezA01 2.60.440.10 Mainly Beta › Sandwich › YacF-like › YacF-like domains 0.59 47.0 4.68e-01 89.2% 85.9%
4dxzA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.46e-01 98.6% 91.0%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.84e-01 95.9% 93.5%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 49.0 4.13e-01 100.0% 96.4%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.78e-01 100.0% 90.4%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.41e-01 98.6% 76.5%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 4.17e-01 90.5% 84.6%
3fcsA02 2.60.40.1460 Mainly Beta › Sandwich › Immunoglobulin-like › Integrin domains. Chain A, domain 2 0.56 49.0 3.91e-01 98.6% 48.7%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.68e-01 94.6% 92.1%
2wanA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 39.0 3.70e-01 91.9% 64.8%
2e9wA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 4.04e-01 91.9% 81.3%
2vecA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 44.0 4.03e-01 97.3% 74.8%
5m0tB00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.51 44.0 3.05e-01 100.0% 44.1%
1w3fA02 2.170.15.10 Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 0.51 41.0 3.33e-01 95.9% 83.0%
3on7B00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.50 41.0 2.95e-01 100.0% 40.6%
5dawA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.50 43.0 2.95e-01 100.0% 42.7%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3413868 11.1.5.27 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep 0.74 66.0 5.21e-01 97.3% 60.7%
3923830 11.1.5.27 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep 0.71 63.0 4.93e-01 95.9% 54.7%
5070705 11.1.1.1402 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_recep 0.70 62.0 5.31e-01 98.6% 69.2%
3588730 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.68 60.0 5.52e-01 97.3% 97.9%
3460800 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 60.0 4.74e-01 98.6% 54.0%
3465642 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 59.0 4.48e-01 98.6% 43.9%
3653662 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 57.0 4.81e-01 98.6% 56.0%
5080360 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.67 54.0 3.75e-01 89.2% 27.5%
3675980 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 59.0 4.83e-01 98.6% 54.8%
3695709 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 59.0 4.68e-01 100.0% 51.0%
3282461 11.1.5.28 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1775 0.66 58.0 4.53e-01 97.3% 51.2%
4011072 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 59.0 4.60e-01 100.0% 50.6%
3460178 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.66 59.0 5.08e-01 98.6% 67.8%
5057853 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.66 58.0 4.62e-01 98.6% 51.3%
3453413 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.66 57.0 4.51e-01 98.6% 61.3%
3834404 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 57.0 4.68e-01 98.6% 55.7%
4557855 11.1.5.49 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › bMG10 0.65 57.0 4.51e-01 98.6% 60.6%
3831628 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 57.0 4.61e-01 98.6% 56.6%
3175627 11.1.5.133 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF29916 0.65 55.0 4.59e-01 98.6% 60.7%
3401442 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.64 56.0 4.64e-01 100.0% 57.8%
162810 11.1.5.22 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Collagen_bind 0.64 54.0 4.26e-01 95.9% 62.1%
5054720 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.64 56.0 4.99e-01 98.6% 72.4%
3679929 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 54.0 4.54e-01 98.6% 60.0%
4379979 11.1.5.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GBS104-like_Ig 0.63 54.0 4.33e-01 97.3% 51.6%
1714453 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.63 53.0 4.97e-01 95.9% 96.8%
5074893 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 5.07e-01 95.9% 87.8%
5044740 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.63 54.0 4.87e-01 97.3% 73.3%
4943486 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 55.0 4.70e-01 100.0% 62.4%
3678166 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 54.0 4.55e-01 98.6% 60.0%
5071537 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.62 50.0 4.88e-01 89.2% 85.5%
4976546 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 52.0 4.80e-01 97.3% 77.0%
4997183 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 52.0 4.51e-01 95.9% 76.7%
4932804 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.62 54.0 4.57e-01 98.6% 64.0%
3479982 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 51.0 4.35e-01 95.9% 73.1%
4932769 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 53.0 4.60e-01 100.0% 70.0%
1014044 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.61 53.0 4.08e-01 100.0% 89.3%
3659911 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.08e-01 98.6% 48.8%
5060733 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 51.0 3.63e-01 98.6% 29.6%
3491151 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.18e-01 98.6% 62.7%
3437261 10.32.1.194 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › APD1-4_N 0.60 49.0 4.39e-01 95.9% 100.0%
3640145 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.60 52.0 4.04e-01 100.0% 44.1%
5071958 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 50.0 3.58e-01 98.6% 30.4%
4990898 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 52.0 4.82e-01 100.0% 100.0%
4972680 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 49.0 4.57e-01 94.6% 100.0%
5046630 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 49.0 4.36e-01 95.9% 88.7%
3435203 11.1.1.942 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28665 0.59 46.0 3.66e-01 97.3% 40.6%
4980338 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 51.0 4.48e-01 100.0% 99.1%
4959663 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.59 50.0 4.34e-01 100.0% 76.8%
4028545 929.1.1.0 ↗ beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.59 49.0 4.90e-01 93.2% 97.3%
5049497 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.47e-01 97.3% 70.5%
5018863 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 49.0 4.45e-01 97.3% 80.0%
3927093 11.1.1.112 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1 0.58 52.0 4.01e-01 100.0% 50.9%
360238 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 47.0 3.66e-01 93.2% 96.1%
1392944 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 50.0 3.72e-01 100.0% 42.6%
222219 10.2.1.40 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TNV_CP 0.58 49.0 3.78e-01 100.0% 90.4%
3579923 11.1.5.121 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Integrin_A_Ig_1 0.57 51.0 4.52e-01 100.0% 75.5%
2995198 10.2.1.54 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N 0.57 48.0 3.73e-01 100.0% 92.1%
3523072 11.1.1.112 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1 0.57 50.0 3.90e-01 98.6% 49.7%
4938818 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 4.01e-01 98.6% 57.4%
3622188 11.1.1.112 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1 0.57 50.0 4.07e-01 98.6% 60.7%
3510171 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.57 48.0 4.18e-01 98.6% 92.0%
4969217 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 48.0 4.41e-01 100.0% 95.2%
5064648 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 48.0 4.47e-01 100.0% 97.0%
3231518 11.1.1.112 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1 0.57 50.0 4.05e-01 98.6% 60.0%
4934399 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 49.0 4.24e-01 98.6% 87.5%
3396429 11.1.1.969 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TRAPPC10 0.56 48.0 4.12e-01 98.6% 63.2%
3743586 11.1.1.915 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26111 0.56 46.0 3.95e-01 93.2% 88.0%
4030043 929.1.1.0 ↗ beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.56 47.0 4.45e-01 100.0% 83.2%
3274716 11.1.4.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_20 0.56 39.0 3.94e-01 74.3% 94.7%
3591145 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 47.0 4.20e-01 98.6% 95.5%
4404708 929.1.1.0 ↗ beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.55 46.0 4.68e-01 97.3% 100.0%
3718531 11.1.1.360 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig 0.55 45.0 2.93e-01 97.3% 20.7%
1165730 10.20.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N_2 0.54 45.0 4.17e-01 98.6% 78.2%
5060870 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 45.0 4.13e-01 100.0% 81.9%
3596983 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 42.0 3.74e-01 93.2% 95.8%
3938357 10.30.1.1 ↗ beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin 0.53 44.0 4.00e-01 97.3% 98.1%
4053467 10.30.1.1 ↗ beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin 0.53 44.0 4.02e-01 98.6% 97.1%
3315778 10.30.1.1 ↗ beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin 0.53 42.0 3.96e-01 95.9% 97.0%
3406923 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 44.0 4.00e-01 98.6% 99.0%
3253381 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 4.17e-01 97.3% 78.9%
3389637 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 44.0 3.95e-01 100.0% 97.3%
4982351 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 43.0 3.80e-01 98.6% 99.2%
2883188 929.1.1.0 ↗ beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.51 43.0 4.29e-01 100.0% 100.0%
4462900 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 42.0 3.84e-01 100.0% 98.2%
D5 medium residues 718-773
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ej6A04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 40.0 2.76e-01 87.5% 54.8%