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NC_029042.1__YP_009220911.1__SP38_167__00167

Bact-Vir

NC_029042.1__YP_009220911.1__SP38_167__00167

Identity

Accession:
NC_029042 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wn9A00 3.40.1530.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › TTHA1528-like 0.50 39.0 3.13e-01 87.9% 77.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3056108 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.85 77.0 5.82e-01 100.0% 44.5%
3188127 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.60 46.0 3.11e-01 86.2% 29.2%
5023522 4042.1.1.3 a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_5 0.53 43.0 3.30e-01 93.1% 51.0%
4927223 4042.1.1.1 a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6 0.53 42.0 3.32e-01 93.1% 48.6%
3471019 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.52 42.0 3.30e-01 94.8% 76.4%