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NC_029048.2__YP_009221677.1__PHICD211_20077__00092

Bact-Vir

NC_029048.2__YP_009221677.1__PHICD211_20077__00092

Identity

Accession:
NC_029048 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-59
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.83 75.0 6.72e-01 100.0% 89.2%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.78 61.0 4.67e-01 100.0% 37.6%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 60.0 5.14e-01 100.0% 55.3%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 6.29e-01 100.0% 94.3%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.74 64.0 6.09e-01 100.0% 98.4%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.22e-01 100.0% 70.3%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 58.0 5.53e-01 100.0% 76.6%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 63.0 6.12e-01 100.0% 93.4%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 4.95e-01 100.0% 57.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.55e-01 100.0% 76.0%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.50e-01 100.0% 86.5%
5yprA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 5.34e-01 100.0% 80.7%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 46.0 4.46e-01 79.6% 59.7%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 54.0 5.19e-01 100.0% 73.0%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 6.03e-01 100.0% 93.4%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.34e-01 100.0% 64.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.57e-01 100.0% 85.7%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.70 60.0 5.41e-01 100.0% 80.3%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.63e-01 100.0% 80.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 62.0 5.87e-01 100.0% 92.2%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 62.0 5.87e-01 100.0% 88.9%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 6.06e-01 100.0% 94.7%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 5.47e-01 100.0% 86.8%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.00e-01 100.0% 55.1%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.35e-01 100.0% 67.5%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.94e-01 100.0% 93.0%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.44e-01 100.0% 71.1%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 60.0 6.01e-01 100.0% 98.2%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 5.79e-01 100.0% 98.1%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.10e-01 100.0% 66.3%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.72e-01 100.0% 91.5%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 59.0 5.52e-01 100.0% 91.0%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 59.0 5.31e-01 100.0% 81.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.18e-01 100.0% 72.9%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.75e-01 100.0% 96.6%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.64e-01 100.0% 94.9%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.57e-01 100.0% 90.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.38e-01 100.0% 79.4%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.47e-01 100.0% 83.1%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 58.0 5.58e-01 100.0% 90.2%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.56e-01 100.0% 98.3%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.40e-01 100.0% 90.3%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 57.0 5.56e-01 100.0% 90.0%
2kymA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 57.0 4.78e-01 100.0% 61.3%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 54.0 5.34e-01 94.4% 100.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.40e-01 100.0% 57.5%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 47.0 4.00e-01 79.6% 54.9%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.13e-01 100.0% 47.0%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.91e-01 98.1% 80.0%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 51.0 3.99e-01 100.0% 89.6%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.62 50.0 4.26e-01 100.0% 76.0%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 51.0 4.61e-01 100.0% 74.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.60 48.0 4.49e-01 100.0% 70.4%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.02e-01 100.0% 66.9%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.60 47.0 4.68e-01 92.6% 85.5%
3mxnB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 48.0 3.68e-01 90.7% 78.6%
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 44.0 3.36e-01 81.5% 79.5%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 3.94e-01 100.0% 58.9%
2y8nB02 2.20.70.100 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.60 40.0 4.34e-01 98.1% 88.6%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 50.0 4.70e-01 100.0% 89.7%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 46.0 2.97e-01 100.0% 16.6%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.57 46.0 4.33e-01 100.0% 71.8%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.38e-01 90.7% 100.0%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 42.0 3.15e-01 81.5% 31.6%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.57 43.0 3.27e-01 85.2% 36.9%
1k0eB00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.57 47.0 2.86e-01 100.0% 74.4%
2wfwA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 4.46e-01 88.9% 94.8%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 3.61e-01 92.6% 62.7%
1a2tA00 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 43.0 3.28e-01 88.9% 65.2%
2jrbA00 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.54 42.0 4.00e-01 100.0% 72.3%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 2.86e-01 85.2% 45.6%
3r6aB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 36.0 2.88e-01 74.1% 32.0%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 38.0 3.97e-01 87.0% 93.6%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 42.0 3.10e-01 92.6% 84.7%
1odhA01 2.20.25.670 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain 0.50 38.0 3.54e-01 85.2% 64.8%
1xqaA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 42.0 3.39e-01 96.3% 81.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4951199 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.78 68.0 6.13e-01 100.0% 81.3%
5000593 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.77 67.0 6.06e-01 100.0% 82.7%
5020812 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.77 67.0 6.02e-01 100.0% 82.7%
3338134 4.1.1.155 beta barrels › SH3 › SH3 › SH3 › CRR42-like 0.76 68.0 6.11e-01 100.0% 84.0%
5063688 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.76 66.0 5.66e-01 100.0% 69.7%
3991244 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.75 56.0 5.96e-01 100.0% 95.6%
3910607 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 65.0 6.24e-01 100.0% 92.2%
165220 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 66.0 6.00e-01 100.0% 76.7%
3895018 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.73 65.0 6.12e-01 100.0% 95.4%
4610859 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 65.0 6.09e-01 100.0% 83.1%
162115 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 64.0 5.95e-01 100.0% 79.4%
3899829 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 64.0 5.72e-01 100.0% 72.0%
3267416 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 64.0 5.59e-01 100.0% 67.5%
1930964 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 64.0 5.90e-01 100.0% 79.4%
3910605 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 64.0 5.59e-01 100.0% 75.0%
423468 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 63.0 5.43e-01 100.0% 63.5%
3933965 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 64.0 6.24e-01 100.0% 93.1%
3765007 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 64.0 5.83e-01 100.0% 77.1%
3487686 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.43e-01 100.0% 63.5%
3846069 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.95e-01 100.0% 83.1%
3399284 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.94e-01 100.0% 83.1%
3696092 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.78e-01 100.0% 77.1%
3542246 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.64e-01 100.0% 72.0%
3522947 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 63.0 5.92e-01 100.0% 83.1%
3416133 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.64e-01 100.0% 74.7%
3876823 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 63.0 5.61e-01 100.0% 72.0%
3217112 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.75e-01 100.0% 77.1%
3391702 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.50e-01 100.0% 67.5%
3896701 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.27e-01 100.0% 60.0%
3789233 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.86e-01 100.0% 86.2%
3566206 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.72e-01 100.0% 77.1%
4019925 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.75e-01 100.0% 77.1%
3535437 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 63.0 6.08e-01 100.0% 90.0%
3618274 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 63.0 5.26e-01 100.0% 60.0%
3750163 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.76e-01 100.0% 77.1%
3719452 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 62.0 5.72e-01 100.0% 77.1%
3259033 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 62.0 6.04e-01 100.0% 90.0%
4133335 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.89e-01 100.0% 88.3%
3573775 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 5.81e-01 100.0% 83.1%
3671396 4.1.1.316 beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.70 58.0 5.30e-01 100.0% 69.9%
3886646 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.87e-01 100.0% 83.1%
3275623 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.34e-01 100.0% 65.9%
3554994 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 62.0 5.24e-01 100.0% 62.9%
3270547 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.87e-01 100.0% 83.1%
3924337 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 62.0 6.03e-01 100.0% 93.3%
3542245 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.70e-01 100.0% 77.1%
3502388 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.03e-01 100.0% 64.0%
3702915 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 6.02e-01 100.0% 91.7%
4483819 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 62.0 5.70e-01 100.0% 77.1%
3748846 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 62.0 5.83e-01 100.0% 83.1%
3561013 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 62.0 5.54e-01 100.0% 72.0%
3911321 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 61.0 5.34e-01 98.1% 66.3%
4949773 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.69 60.0 4.36e-01 100.0% 35.9%
3526950 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 61.0 5.95e-01 100.0% 90.0%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.92e-01 100.0% 93.3%
3747208 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 62.0 5.41e-01 100.0% 67.5%
3574751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.93e-01 92.6% 100.0%
3217113 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.72e-01 98.1% 81.5%
3900208 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 61.0 5.82e-01 100.0% 84.4%
3899851 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 61.0 5.78e-01 100.0% 83.1%
3904253 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 62.0 5.83e-01 100.0% 86.2%
3619598 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 60.0 5.17e-01 98.1% 64.7%
165657 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.68e-01 100.0% 80.6%
3503780 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 61.0 5.78e-01 100.0% 83.1%
5022448 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.41e-01 100.0% 85.3%
4104114 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 60.0 5.64e-01 100.0% 81.5%
3914346 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.14e-01 100.0% 60.0%
3625909 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.34e-01 100.0% 67.5%
3254502 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 61.0 5.03e-01 100.0% 64.2%
3895391 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 60.0 5.31e-01 100.0% 67.5%
3920103 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 61.0 5.12e-01 100.0% 62.2%
3503782 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 61.0 5.92e-01 100.0% 90.0%
3269589 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 61.0 5.57e-01 100.0% 77.1%
3737825 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 59.0 5.95e-01 98.1% 96.4%
2834765 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 60.0 5.55e-01 100.0% 78.3%
3214149 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 58.0 5.51e-01 96.3% 80.0%
3398702 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 60.0 5.83e-01 100.0% 90.0%
3241067 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 4.53e-01 100.0% 46.4%
3512419 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 60.0 5.15e-01 100.0% 68.2%
3539147 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 59.0 5.48e-01 100.0% 77.1%
3906249 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 59.0 5.33e-01 100.0% 72.0%
3317929 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 60.0 4.87e-01 100.0% 54.0%
3483363 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.23e-01 100.0% 78.5%
3415045 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 59.0 5.43e-01 100.0% 78.6%
3659579 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 59.0 5.31e-01 100.0% 72.0%
3882808 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 58.0 5.27e-01 100.0% 72.0%
2410170 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.66 58.0 5.57e-01 100.0% 95.2%
3366511 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 58.0 5.47e-01 98.1% 81.5%
3846212 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 58.0 5.11e-01 100.0% 70.0%
3585447 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 58.0 5.11e-01 100.0% 67.5%
3926017 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.40e-01 100.0% 89.1%
3742291 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 56.0 5.38e-01 100.0% 87.7%
3240192 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 58.0 5.20e-01 100.0% 74.7%
3723808 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 56.0 5.36e-01 100.0% 87.7%
3511551 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.39e-01 100.0% 86.7%
4028731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.37e-01 100.0% 86.2%
3929784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.41e-01 100.0% 98.0%
279006 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 56.0 5.25e-01 100.0% 82.6%
3871253 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.61 47.0 3.64e-01 90.7% 57.9%
3941320 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.60 49.0 4.45e-01 100.0% 66.7%
D2 high residues 72-139
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.76 60.0 5.11e-01 83.8% 61.9%
2h1qA01 3.30.390.100 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.70 54.0 4.41e-01 83.8% 65.6%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.65 47.0 4.51e-01 77.9% 90.1%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.64 46.0 4.36e-01 77.9% 88.2%
5mmiG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.64 47.0 4.41e-01 77.9% 88.1%
8cvmg01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.64 46.0 4.55e-01 77.9% 98.6%
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.64 46.0 4.42e-01 77.9% 93.7%
1xeaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.61 51.0 3.62e-01 89.7% 100.0%
3witA00 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.59 36.0 3.77e-01 85.3% 65.6%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 46.0 4.03e-01 86.8% 86.1%
2r15A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 3.47e-01 76.5% 45.0%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.58 40.0 3.40e-01 73.5% 47.1%
5bncA02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.58 43.0 3.91e-01 79.4% 84.9%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.58 47.0 3.25e-01 91.2% 51.4%
3fy6A01 3.30.2210.10 Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily 0.57 47.0 4.06e-01 89.7% 99.1%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 42.0 2.75e-01 80.9% 23.2%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.57 44.0 3.56e-01 83.8% 50.0%
4lxqB00 3.40.50.12230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 46.0 3.14e-01 91.2% 60.9%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 35.0 2.69e-01 70.6% 26.6%
4ifsA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.56 43.0 3.50e-01 83.8% 50.8%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 43.0 3.49e-01 80.9% 47.5%
3kd6A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 42.0 2.78e-01 80.9% 44.3%
5yjlC02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.56 45.0 3.89e-01 91.2% 82.0%
1dq3A02 3.30.160.90 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 39.0 3.79e-01 79.4% 68.4%
2ofqA01 2.60.40.2500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 3.58e-01 77.9% 85.4%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 38.0 2.33e-01 80.9% 33.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.51 39.0 3.85e-01 82.4% 93.0%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 37.0 2.80e-01 79.4% 68.0%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.69e-01 98.5% 23.5%
1wkrA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.50 37.0 2.92e-01 83.8% 77.6%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039841 330.1.1.36 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › ERF 0.76 55.0 4.66e-01 76.5% 61.8%
5075279 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 55.0 4.63e-01 89.7% 50.4%
146720 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.68 54.0 4.74e-01 86.8% 83.3%
3451427 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.68 47.0 4.51e-01 73.5% 88.7%
5051764 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.66 49.0 3.76e-01 79.4% 38.1%
4989457 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 46.0 5.10e-01 76.5% 100.0%
4088600 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.65 46.0 4.31e-01 75.0% 90.6%
4558826 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.64 48.0 4.56e-01 79.4% 93.8%
3492330 5.1.4.116 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.64 46.0 2.90e-01 77.9% 17.1%
4929896 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.64 46.0 4.42e-01 77.9% 92.5%
3499149 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.63 46.0 2.81e-01 77.9% 14.7%
4364399 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.63 44.0 4.06e-01 75.0% 90.0%
3838921 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.62 45.0 4.31e-01 77.9% 88.7%
4082530 865.1.1.2 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › TilS_C 0.61 45.0 3.89e-01 79.4% 84.5%
4242523 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.61 43.0 4.18e-01 76.5% 88.7%
3739717 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.60 42.0 4.00e-01 75.0% 89.4%
3935726 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.58 41.0 3.46e-01 75.0% 87.7%
3289559 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 48.0 3.08e-01 89.7% 41.7%
4980224 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.57 44.0 3.65e-01 89.7% 44.8%
4960280 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 38.0 3.47e-01 70.6% 60.0%
4977715 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 39.0 3.27e-01 70.6% 76.5%
3389939 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 44.0 3.33e-01 88.2% 56.1%
1734827 3270.1.1.1 a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.56 45.0 3.89e-01 91.2% 82.0%
3708068 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 3.11e-01 94.1% 30.2%
3928305 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.55 43.0 3.10e-01 86.8% 35.8%
3416239 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 38.0 3.53e-01 70.6% 60.2%
3931343 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.54 39.0 3.33e-01 76.5% 88.7%
5063391 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.53 44.0 3.51e-01 88.2% 47.7%
3933744 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.53 38.0 3.31e-01 77.9% 93.6%
3389900 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 43.0 3.19e-01 91.2% 40.0%
1921563 101.1.2.175 alpha arrays › HTH › HTH › winged helix domain › HTH_57 0.53 39.0 3.45e-01 80.9% 89.7%
3286598 2498.2.1.0 mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain 0.53 40.0 3.07e-01 85.3% 97.7%
2576776 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.53 38.0 2.52e-01 77.9% 21.4%
3826368 1.1.1.27 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.51 40.0 2.90e-01 86.8% 84.8%
6256 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.50 35.0 2.49e-01 72.1% 71.8%