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NC_029048.2__YP_009221766.1__PHICD211_20162__00181
Bact-VirNC_029048.2__YP_009221766.1__PHICD211_20162__00181
Identity
- Accession:
- NC_029048 ↗
- Kingdom:
- phage
Quality
96.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-72
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.67 | 58.0 | 5.43e-01 | 95.8% | 93.2% |
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.66 | 39.0 | 4.32e-01 | 84.5% | 74.5% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.62 | 38.0 | 4.11e-01 | 84.5% | 75.4% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.61 | 52.0 | 4.76e-01 | 95.8% | 82.1% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.59 | 48.0 | 4.54e-01 | 93.0% | 90.8% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 3.64e-01 | 100.0% | 57.6% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.55 | 41.0 | 3.52e-01 | 81.7% | 50.8% |
| 3vcxA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 37.0 | 4.15e-01 | 90.1% | 96.2% |
| 3qwuA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 34.0 | 3.84e-01 | 97.2% | 100.0% |
| 2uz8A01 | 3.40.30.90 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.53 | 34.0 | 3.76e-01 | 91.5% | 87.0% |
| 3pufL00 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 41.0 | 3.58e-01 | 91.5% | 66.4% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.39e-01 | 85.9% | 85.1% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.51 | 40.0 | 3.70e-01 | 93.0% | 79.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938029 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.67 | 54.0 | 4.93e-01 | 91.5% | 84.7% |
| 3338200 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.65 | 57.0 | 4.50e-01 | 100.0% | 90.3% |
| 5029836 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.64 | 53.0 | 5.10e-01 | 91.5% | 91.3% |
| 3822279 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.61 | 53.0 | 4.20e-01 | 100.0% | 88.0% |
| 3177446 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.59 | 44.0 | 2.85e-01 | 93.0% | 16.2% |
| 3173622 | 5.1.3.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 | 0.58 | 44.0 | 2.83e-01 | 93.0% | 16.6% |
| 3287567 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.57 | 47.0 | 4.39e-01 | 93.0% | 83.3% |
| 4026255 | 5.1.3.160 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 | 0.56 | 47.0 | 3.03e-01 | 100.0% | 21.5% |
| 3214385 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.56 | 34.0 | 3.45e-01 | 91.5% | 60.0% |
| 3623943 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.56 | 33.0 | 3.29e-01 | 91.5% | 53.3% |
| 2770114 | 5.1.4.301 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7 | 0.54 | 43.0 | 2.83e-01 | 91.5% | 18.8% |
| 4000403 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.53 | 32.0 | 3.48e-01 | 85.9% | 80.0% |
| 3580190 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.53 | 43.0 | 3.96e-01 | 91.5% | 85.3% |
| 4939371 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 42.0 | 3.75e-01 | 100.0% | 59.1% |
| 3829376 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 41.0 | 3.42e-01 | 91.5% | 86.9% |
| 4139105 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.52 | 36.0 | 2.82e-01 | 74.6% | 80.0% |
| 3837276 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.51 | 36.0 | 3.78e-01 | 95.8% | 84.6% |
| 3248993 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.51 | 41.0 | 2.75e-01 | 95.8% | 20.6% |
| 4567805 | 5.1.4.42 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_4 | 0.51 | 43.0 | 2.83e-01 | 98.6% | 21.8% |
| 4928227 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.50 | 41.0 | 4.11e-01 | 91.5% | 100.0% |