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NC_029048.2__YP_009221778.1__PHICD211_20171__00003
Bact-VirNC_029048.2__YP_009221778.1__PHICD211_20171__00003
Identity
- Accession:
- NC_029048 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-54
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y9bA00 | 1.20.5.780 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.82 | 71.0 | 5.79e-01 | 100.0% | 53.1% |
| 3v7dD01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.78 | 63.0 | 4.93e-01 | 97.7% | 41.0% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 54.0 | 4.33e-01 | 77.3% | 38.8% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 62.0 | 5.83e-01 | 88.6% | 75.5% |
| 3veaA02 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.76 | 64.0 | 6.17e-01 | 100.0% | 84.6% |
| 3e21A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 51.0 | 5.29e-01 | 72.7% | 85.0% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 49.0 | 4.72e-01 | 75.0% | 62.0% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 45.0 | 4.41e-01 | 75.0% | 62.0% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.66 | 49.0 | 4.00e-01 | 84.1% | 47.8% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 45.0 | 4.30e-01 | 75.0% | 59.3% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 3.95e-01 | 75.0% | 57.1% |
| 2ekfA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 41.0 | 4.13e-01 | 75.0% | 78.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028248 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.80 | 55.0 | 5.31e-01 | 72.7% | 64.0% |
| 5000788 | 5060.1.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C | 0.79 | 61.0 | 4.47e-01 | 81.8% | 37.1% |
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.78 | 58.0 | 5.44e-01 | 86.4% | 65.5% |
| 3359932 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.74 | 54.0 | 4.85e-01 | 86.4% | 55.4% |
| 3736440 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.70 | 49.0 | 4.94e-01 | 75.0% | 77.8% |
| 3714403 | 103.1.1.2 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CUE | 0.63 | 43.0 | 4.28e-01 | 70.5% | 68.9% |
| 3571030 | 103.1.1.100 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › DUF7816 | 0.62 | 42.0 | 4.23e-01 | 72.7% | 75.6% |
| 3392367 | 103.1.1.95 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28512 | 0.62 | 41.0 | 4.01e-01 | 70.5% | 62.0% |