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NC_029057.1__YP_009222108.1__AXI64_gp097__00097
Bact-VirNC_029057.1__YP_009222108.1__AXI64_gp097__00097
Identity
- Accession:
- NC_029057 ↗
- Kingdom:
- phage
Quality
76.2
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 40.0 | 3.30e-01 | 72.7% | 85.9% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 36.0 | 3.44e-01 | 100.0% | 58.2% |
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.53 | 40.0 | 3.24e-01 | 81.8% | 50.6% |
| 3qcpA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 36.0 | 2.83e-01 | 70.1% | 86.5% |
| 6r2nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 42.0 | 3.54e-01 | 90.9% | 97.9% |
| 4hxfB02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 3.03e-01 | 93.5% | 83.5% |
| 1q5qH00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 41.0 | 3.11e-01 | 92.2% | 96.0% |
| 3c8iA00 | 2.40.410.10 | Mainly Beta › Beta Barrel › putative membrane protein from Corynebacterium diphtheriae fold › putative membrane protein from Corynebacterium diphtheriae superfamily | 0.52 | 40.0 | 3.48e-01 | 87.0% | 89.8% |
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.50 | 45.0 | 3.28e-01 | 100.0% | 78.8% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 28.0 | 2.91e-01 | 96.1% | 55.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.28e-01 | 79.2% | 95.3% |
| 3734163 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.58 | 39.0 | 2.82e-01 | 70.1% | 78.0% |
| 4028633 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.55 | 41.0 | 2.77e-01 | 80.5% | 49.7% |
| 3581140 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 46.0 | 3.20e-01 | 98.7% | 64.1% |
| 140490 | 6.1.1.13 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Toxin_R_bind_C | 0.54 | 45.0 | 3.35e-01 | 93.5% | 54.6% |
| 4185962 | 2484.1.1.122 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2209 | 0.53 | 43.0 | 3.80e-01 | 93.5% | 94.4% |
| 3984789 | 2002.5.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain | 0.51 | 37.0 | 2.73e-01 | 80.5% | 34.0% |
| None | — | 0.51 | 41.0 | 2.41e-01 | 90.9% | 54.0% | |
| 3808873 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.50 | 41.0 | 3.54e-01 | 92.2% | 87.2% |