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NC_029067.1__YP_009222877.1__VPLG_00028__00028
Bact-VirNC_029067.1__YP_009222877.1__VPLG_00028__00028
Identity
- Accession:
- NC_029067 ↗
- Kingdom:
- phage
Quality
59.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-100
Domain cluster:
rep: KC460990.1__AGN89462.1__Eta_0016__00016__D85-171
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 38.0 | 4.55e-01 | 88.2% | 67.8% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 43.0 | 5.39e-01 | 89.4% | 92.2% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 39.0 | 4.49e-01 | 89.4% | 68.3% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 46.0 | 5.25e-01 | 87.1% | 84.1% |
| 2r7dA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 33.0 | 3.91e-01 | 87.1% | 61.7% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 5.25e-01 | 100.0% | 89.2% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 44.0 | 5.30e-01 | 95.3% | 94.9% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.68 | 40.0 | 4.88e-01 | 95.3% | 98.0% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 38.0 | 4.06e-01 | 89.4% | 65.8% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 42.0 | 5.04e-01 | 91.8% | 100.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 44.0 | 4.96e-01 | 100.0% | 95.3% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 34.0 | 3.79e-01 | 87.1% | 67.2% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 42.0 | 4.60e-01 | 95.3% | 84.3% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 45.0 | 4.67e-01 | 95.3% | 83.3% |
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 42.0 | 3.50e-01 | 76.5% | 82.6% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 4.12e-01 | 85.9% | 75.8% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.51 | 30.0 | 3.44e-01 | 92.9% | 80.6% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 41.0 | 3.66e-01 | 90.6% | 87.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3393360 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 50.0 | 4.48e-01 | 84.7% | 53.0% |
| 3313119 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 47.0 | 4.83e-01 | 85.9% | 71.2% |
| 3832128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 47.0 | 4.53e-01 | 95.3% | 61.1% |
| 3815479 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 47.0 | 5.01e-01 | 95.3% | 77.3% |
| 3188732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 49.0 | 5.13e-01 | 72.9% | 98.7% |
| 3507664 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 45.0 | 5.31e-01 | 95.3% | 95.0% |
| 3398298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 47.0 | 4.88e-01 | 70.6% | 77.5% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 5.14e-01 | 95.3% | 82.7% |
| 3925069 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.62 | 53.0 | 4.42e-01 | 90.6% | 85.7% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 51.0 | 4.26e-01 | 88.2% | 86.4% |
| 3401355 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.60 | 46.0 | 4.28e-01 | 100.0% | 65.4% |
| 4658852 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.60 | 40.0 | 2.80e-01 | 82.4% | 21.9% |
| 3333322 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 50.0 | 4.22e-01 | 89.4% | 88.1% |
| 3939132 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 49.0 | 4.67e-01 | 100.0% | 86.0% |
D2
high
residues 129-196