Back to structures

NC_029074.1__YP_009223982.1__AXJ10_gp74__00074

Bact-Vir

NC_029074.1__YP_009223982.1__AXJ10_gp74__00074

Identity

Accession:
NC_029074 ↗
Kingdom:
phage

Quality

71.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-108
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.59 42.0 3.57e-01 74.3% 82.6%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.59 39.0 4.14e-01 86.1% 75.0%
6foqA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.56 43.0 3.44e-01 82.2% 94.8%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.51 38.0 3.35e-01 79.2% 64.1%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 31.0 3.18e-01 91.1% 60.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838346 589.1.1.19 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › Rotamase_2 0.52 33.0 2.52e-01 88.1% 27.8%
3534502 109.4.1.1310 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N 0.51 43.0 2.58e-01 93.1% 40.6%
3250477 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 4.37e-01 99.0% 89.9%