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YP_009226233.1

Arc-Vir

NC_029103__YP_009226233.1__AXI69-gp10__00010

Identity

Accession:
NC_029103 ↗
Protein ID:
YP_009226233.1 ↗
Kingdom:
archaea

Quality

84.6 mean pLDDT

Taxonomy

Bicaudaviridae› Sulfolobus_monocaudavirus_SMV3

TaxID: 1732177

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 285-308_310-328_332-343_345-347_349-363
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.65 46.0 3.88e-01 72.6% 48.7%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.58 42.0 4.10e-01 78.1% 92.6%
2zc2A00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.54 39.0 3.93e-01 79.5% 82.7%
D2 medium residues 20-28_31-86_216-279
PDB
Domain cluster: rep: IMGVR_UViG_3300027932_000064-3300027932-Ga0208429_1000321__D1161-1222_1350-1427
D3 medium residues 87-95_102-103_106-118_120-127_132-133_135-143_145-156_158-159_161-173_176-177_185-186_188-192_194-215
PDB
Domain cluster: representative