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YP_009226244.1
Arc-VirNC_029103__YP_009226244.1__AXI69-gp21__00021
Identity
- Accession:
- NC_029103 ↗
- Protein ID:
- YP_009226244.1 ↗
- Kingdom:
- archaea
Quality
55.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 179-244
D2
medium
residues 1-50
D3
medium
residues 51-127_129-152
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z47A02 | 2.40.50.300 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 29.0 | 4.17e-01 | 84.2% | 100.0% |
| 2c1lA02 | 2.40.330.30 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › | 0.59 | 50.0 | 4.19e-01 | 91.1% | 94.7% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 4.06e-01 | 90.1% | 93.3% |
| 1ghjA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 30.0 | 3.27e-01 | 84.2% | 72.2% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 4.05e-01 | 85.1% | 95.7% |
| 3wwvA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 32.0 | 3.74e-01 | 91.1% | 100.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1140148 | 1.1.11.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › BfiI_DBD | 0.59 | 50.0 | 4.22e-01 | 92.1% | 98.2% |
| 2440701 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.58 | 47.0 | 4.33e-01 | 88.1% | 85.5% |
| 2605239 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 47.0 | 4.40e-01 | 89.1% | 95.8% |
| 3606891 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.55 | 46.0 | 3.24e-01 | 94.1% | 90.1% |
| 4990113 | 2485.1.1.37 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 | 0.55 | 47.0 | 4.07e-01 | 94.1% | 72.3% |
| 3462303 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 46.0 | 3.68e-01 | 96.0% | 63.4% |
| 5007187 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.53 | 33.0 | 3.69e-01 | 78.2% | 82.7% |
| 5059024 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 36.0 | 3.78e-01 | 78.2% | 78.9% |
| 4883516 | 2.11.1.1 ↗ | beta barrels › OB-fold › Antifungal protein (AGAFP) › Antifungal protein (AGAFP) › Antifungal_prot | 0.52 | 30.0 | 3.74e-01 | 89.1% | 100.0% |
| 3890848 | 221.1.1.9 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd,PIK3CG_ABD | 0.50 | 39.0 | 2.78e-01 | 82.2% | 38.3% |