YP_009226298.1

Arc-Vir

NC_029103__YP_009226298.1__AXI69-gp75__00075

Identity

84.9 mean pLDDT

Bicaudaviridae› Sulfolobus_monocaudavirus_SMV3

TaxID: 1732177

View cluster (2 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-126

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kxyT00	6.20.290.10	Special › Other non-globular › Dna Ligase; domain 1 ›	0.64	23.0	2.65e-01	85.2%	43.1%
2ds2D01	1.10.110.10	Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins	0.58	25.0	3.03e-01	73.9%	57.9%
3npiB00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.54	42.0	3.23e-01	84.1%	66.2%
3ousA00	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.54	33.0	3.41e-01	80.7%	64.6%
1hzfA00	1.50.10.20	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.52	44.0	3.17e-01	98.9%	70.5%
2ckoA02	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.52	38.0	2.78e-01	79.5%	85.8%
7wd3A04	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.51	36.0	3.83e-01	94.3%	82.1%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2968810	2485.1.1.10 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA	0.52	45.0	3.47e-01	96.6%	62.3%
3994151	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.52	45.0	3.07e-01	97.7%	66.1%
4839755	2484.1.1.85 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC_III	0.52	45.0	3.88e-01	97.7%	60.1%