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NC_029119.1__YP_009226724.1__AXJ01_gp048__00048

Bact-Vir

NC_029119.1__YP_009226724.1__AXJ01_gp048__00048

Identity

Accession:
NC_029119 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-135
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27287.1 best YomO 31.6 1.60e-07 99.0% 52.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x4oA00 1.10.10.790 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module 0.63 30.0 3.43e-01 100.0% 57.7%
3itfA00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.52 26.0 2.61e-01 89.1% 41.4%
2ii2A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.52 29.0 3.03e-01 99.0% 55.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073496 3721.1.1.0 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain 0.65 31.0 4.46e-01 71.3% 96.0%
3924740 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.50 30.0 3.30e-01 88.1% 71.8%