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NC_029119.1__YP_009226747.1__AXJ01_gp071__00071

Bact-Vir

NC_029119.1__YP_009226747.1__AXJ01_gp071__00071

Identity

Accession:
NC_029119 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Staphylococcus_phage_SPbeta-like

TaxID: 1732063

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-132
PDB
Domain cluster: rep: MT889387.1__QOP66146.1__SEA_DANIELLEIGNACE_5__00005__D28-163
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05866.17 best RusA 26.3 1.30e-05 82.2% 61.0%
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q8rA00 3.30.1330.70 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA 0.83 70.0 7.37e-01 100.0% 96.6%
2r75102 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.69 47.0 5.05e-01 100.0% 81.8%
2xkbL00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.68 49.0 3.55e-01 100.0% 25.9%
1ofuA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.65 44.0 5.03e-01 100.0% 96.8%
3zidB00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.62 43.0 3.14e-01 100.0% 26.6%
4nq3A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.62 42.0 4.70e-01 100.0% 92.9%
4ei7B01 3.30.1330.190 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.61 48.0 4.67e-01 100.0% 74.1%
5hweA01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.61 43.0 4.63e-01 100.0% 87.9%
5l16A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.61 43.0 4.48e-01 100.0% 77.2%
2yxzD01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.61 44.0 4.25e-01 100.0% 66.9%
1yawB01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.61 43.0 4.32e-01 100.0% 70.9%
5hy0A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.60 43.0 4.60e-01 100.0% 88.0%
3cb2A02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.59 44.0 4.91e-01 100.0% 100.0%
3mcqA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.59 42.0 4.15e-01 100.0% 69.4%
1pf5A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.58 41.0 4.18e-01 100.0% 73.8%
2ig8A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.58 43.0 4.22e-01 100.0% 71.8%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.57 46.0 4.26e-01 100.0% 66.9%
1cliB01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.57 43.0 4.12e-01 100.0% 67.3%
2rb9A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.57 41.0 3.99e-01 100.0% 66.0%
1vk3A03 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.57 42.0 4.05e-01 100.0% 67.3%
3rycB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.57 44.0 4.68e-01 100.0% 93.0%
2otmA00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.57 47.0 4.54e-01 100.0% 77.5%
3d01E00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.57 48.0 4.51e-01 100.0% 76.1%
2c5sA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.57 39.0 3.59e-01 98.4% 53.3%
3kizA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.56 45.0 4.46e-01 100.0% 80.9%
3qvsA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 37.0 4.03e-01 96.9% 85.1%
2btoB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.55 41.0 4.45e-01 100.0% 97.1%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.55 46.0 4.66e-01 100.0% 92.4%
3byqA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.54 49.0 4.31e-01 100.0% 74.3%
3tmaA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.54 39.0 3.74e-01 100.0% 62.6%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.54 48.0 4.47e-01 98.4% 87.7%
1nvmB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 34.0 3.24e-01 96.1% 53.2%
6izhE00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.52 40.0 4.16e-01 100.0% 87.6%
6aeoB01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.52 43.0 4.31e-01 99.2% 86.7%
1dihA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 37.0 3.95e-01 96.1% 88.0%
2iu4A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.51 46.0 4.38e-01 98.4% 87.4%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4156345 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.87 75.0 7.84e-01 100.0% 96.7%
3982309 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.86 73.0 7.58e-01 100.0% 95.0%
318712 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.84 71.0 7.37e-01 100.0% 95.0%
5081957 301.4.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.78 72.0 6.81e-01 99.2% 97.3%
5032184 301.4.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.74 60.0 6.43e-01 100.0% 100.0%
5083025 301.4.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.73 65.0 6.67e-01 100.0% 98.4%
4537541 301.4.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA 0.73 62.0 6.41e-01 100.0% 98.3%
4972086 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.69 44.0 3.64e-01 100.0% 35.7%
405240 301.6.1.7 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › TubZ-like_C 0.69 50.0 4.65e-01 100.0% 59.5%
4289937 298.4.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E 0.65 41.0 4.47e-01 95.3% 76.2%
4991436 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.65 43.0 2.93e-01 100.0% 19.3%
4987759 301.6.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.62 46.0 4.20e-01 100.0% 58.3%
4928819 301.6.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.62 41.0 4.49e-01 100.0% 83.8%
3979733 301.3.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.61 43.0 4.65e-01 100.0% 87.6%
3626848 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 44.0 3.90e-01 100.0% 51.4%
5063359 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 40.0 4.01e-01 100.0% 63.7%
4982903 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 42.0 4.01e-01 100.0% 60.0%
4172022 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 4.36e-01 100.0% 73.1%
4948829 304.111.1.4 ↗ a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS 0.60 43.0 3.36e-01 100.0% 33.6%
4134873 301.7.1.3 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Amido_AtzD_TrzD 0.60 43.0 4.50e-01 100.0% 82.6%
5040854 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 4.15e-01 100.0% 65.5%
4159472 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 4.08e-01 100.0% 62.7%
5014625 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 41.0 4.07e-01 100.0% 65.0%
5078391 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 4.13e-01 100.0% 63.3%
341068 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 43.0 4.21e-01 100.0% 67.4%
5052553 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 41.0 4.04e-01 100.0% 65.0%
5001175 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.59 41.0 3.99e-01 100.0% 62.1%
3598818 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.59 42.0 3.84e-01 100.0% 54.9%
4097489 301.7.1.8 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › PF29624 0.59 41.0 4.19e-01 100.0% 74.4%
3603039 298.3.1.2 ↗ a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter 0.58 43.0 4.35e-01 89.1% 78.4%
3706512 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.58 42.0 3.84e-01 100.0% 55.9%
3599896 301.6.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.58 45.0 3.99e-01 100.0% 55.8%
4943452 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.58 41.0 4.03e-01 100.0% 65.5%
4979713 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.58 40.0 3.93e-01 100.0% 62.8%
None — 0.58 42.0 3.72e-01 100.0% 51.6%
3713735 301.7.1.4 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › YjgF_endoribonc 0.58 48.0 4.61e-01 100.0% 77.1%
3516645 301.6.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C 0.57 45.0 3.76e-01 100.0% 49.3%
5010286 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 41.0 3.83e-01 100.0% 58.2%
3740135 4143.1.1.7 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › PF25904 0.57 40.0 4.46e-01 96.9% 96.8%
4945507 301.2.1.5 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS_C 0.57 41.0 4.03e-01 100.0% 67.6%
None — 0.57 42.0 3.68e-01 100.0% 51.6%
3603558 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 41.0 3.93e-01 100.0% 63.2%
4880292 301.7.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.57 48.0 4.55e-01 100.0% 77.6%
None — 0.57 41.0 3.60e-01 100.0% 49.2%
4945531 301.2.1.5 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS_C 0.57 43.0 4.07e-01 100.0% 66.5%
4507920 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 41.0 3.82e-01 100.0% 58.8%
4971955 301.7.1.4 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › YjgF_endoribonc 0.57 47.0 4.53e-01 100.0% 79.1%
4947539 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.56 42.0 3.92e-01 100.0% 60.6%
344504 301.7.1.4 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › YjgF_endoribonc 0.56 47.0 4.51e-01 100.0% 78.1%
3937552 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.56 45.0 4.50e-01 97.7% 83.0%
5022837 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.56 43.0 3.94e-01 100.0% 61.8%
3512632 3008.1.1.2 ↗ a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 0.56 40.0 4.48e-01 89.1% 100.0%
3686696 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.56 50.0 4.52e-01 100.0% 76.7%
3688584 301.7.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.56 42.0 4.16e-01 100.0% 74.3%
5021488 301.7.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.55 41.0 4.10e-01 100.0% 75.4%
4015581 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.55 50.0 4.64e-01 100.0% 82.4%
4994993 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.55 40.0 3.00e-01 100.0% 27.9%
3728115 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.55 50.0 4.50e-01 100.0% 77.2%
5009344 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.55 35.0 4.11e-01 94.6% 97.6%
6981 301.11.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › BB2672-like › BB2672-like › AA_synth 0.54 49.0 4.31e-01 100.0% 74.3%
3959729 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.54 39.0 3.27e-01 100.0% 40.0%
3941746 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.54 49.0 4.47e-01 100.0% 88.6%
3615521 301.6.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C 0.54 44.0 3.86e-01 100.0% 57.0%
3963173 298.1.1.13 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › AcetDehyd-dimer 0.54 35.0 3.31e-01 96.1% 52.9%
4210304 298.1.1.9 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.54 38.0 4.02e-01 72.1% 86.4%
4457354 298.1.1.13 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › AcetDehyd-dimer 0.54 36.0 3.53e-01 71.3% 61.4%
4999237 301.2.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.53 41.0 3.49e-01 100.0% 47.6%
3811404 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.53 48.0 4.47e-01 100.0% 80.6%
4331328 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.52 34.0 3.92e-01 96.1% 94.4%
3797622 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.52 47.0 4.49e-01 100.0% 86.7%
3361675 301.7.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.52 43.0 4.11e-01 100.0% 77.3%
3204382 301.7.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.52 42.0 3.89e-01 100.0% 66.9%
3713598 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.51 47.0 4.23e-01 100.0% 80.0%
1937169 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.51 46.0 4.38e-01 98.4% 87.4%
3473469 301.7.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.51 44.0 4.20e-01 100.0% 82.0%
3274735 301.13.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.50 45.0 4.23e-01 100.0% 82.5%
D2 high residues 142-189
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4q5eA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.67 47.0 3.93e-01 100.0% 39.8%
4ocqA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.62 42.0 2.68e-01 70.8% 57.5%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.55 42.0 2.97e-01 91.7% 25.6%
7aqbB02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 41.0 2.90e-01 97.9% 50.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4004116 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.65 38.0 2.96e-01 72.9% 27.0%
3618459 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 34.0 3.26e-01 75.0% 43.6%
4026623 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.60 48.0 3.27e-01 97.9% 81.0%
3592658 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 39.0 3.45e-01 70.8% 64.0%
3661482 4120.1.1.56 ↗ few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Myb_DNA-bind_3 0.57 46.0 3.95e-01 91.7% 60.0%
3528012 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.54 42.0 2.86e-01 93.8% 73.8%
3733950 593.1.1.1 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 0.54 40.0 2.62e-01 91.7% 32.8%
3224850 388.1.1.5 ↗ few secondary structure elements › Huristasin-like › Huristasin-like › Huristasin-like › CXCXC 0.53 28.0 3.18e-01 97.9% 65.7%
3818705 263.1.1.1 ↗ a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.52 37.0 3.11e-01 75.0% 78.8%
4995516 3053.1.1.1 ↗ beta barrels › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › PmbA_TldD_3rd 0.52 36.0 2.41e-01 75.0% 43.5%
4248515 205.1.1.35 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.50 33.0 2.99e-01 93.8% 49.2%
3595934 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 37.0 2.73e-01 85.4% 89.7%
4261757 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.50 42.0 2.72e-01 100.0% 37.6%
3697768 872.4.1.0 ↗ a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like 0.50 34.0 3.51e-01 97.9% 77.8%