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YP_009230256.1

Arc-Vir

NC_029316__YP_009230256.1__AZ270-gp03__00003

Identity

Accession:
NC_029316 ↗
Protein ID:
YP_009230256.1 ↗
Kingdom:
archaea

Quality

71.2 mean pLDDT

Taxonomy

Bicaudaviridae› Acidianus_tailed_spindle_virus

TaxID: 1797140

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-168
PDB
Domain cluster: rep: IMGVR_UViG_3300033781_000002-3300033781-Ga0326759_00152_5556_6023__D7-153
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 55.0 5.80e-01 81.2% 92.0%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.55 37.0 4.12e-01 70.3% 86.8%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 36.0 3.88e-01 84.2% 80.6%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.52 29.0 3.50e-01 72.7% 82.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
150490 3123.1.1.1 ↗ a+b two layers › Nuclease AFV1-157 › Nuclease AFV1-157 › Nuclease AFV1-157 › DUF3258 0.72 57.0 5.93e-01 81.8% 90.8%
3534691 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.57 35.0 3.59e-01 77.0% 60.0%
3875809 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.57 35.0 3.59e-01 77.0% 60.0%
3748387 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.57 34.0 3.14e-01 84.8% 44.2%
3398781 5087.3.1.2 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd 0.55 39.0 3.27e-01 72.1% 82.8%
3875620 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.52 37.0 3.57e-01 73.3% 75.8%
3750494 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.51 38.0 3.52e-01 75.8% 68.8%